Pairwise Alignments

Query, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score =  357 bits (915), Expect = e-103
 Identities = 166/339 (48%), Positives = 240/339 (70%), Gaps = 1/339 (0%)

Query: 30  PSVHIYNWYDYIAPNTVKDFQKEAGVSVVYDVFDNSEVMQSKLMAGRSGYDVVVASADLL 89
           P+VH YNW DYI P T+ DF+K  G+  V DVFD++E ++ KL+AG +GYDVVV S   L
Sbjct: 26  PTVHFYNWSDYIGPTTLADFEKATGIKPVQDVFDSNETLEGKLLAGNTGYDVVVPSNHFL 85

Query: 90  PNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQSNDPGNSYAAPYLWGTTGIGYDADKVKS 149
              IKAG  ++LD++ LPN+S+LDP ++ +L+ NDPGN YA PYLWGT GIGY+ DKVK+
Sbjct: 86  GKQIKAGAFQKLDKNLLPNYSNLDPALMKRLEKNDPGNQYAVPYLWGTNGIGYNVDKVKA 145

Query: 150 LLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGEVIPIALHYLGLPYNSHNPDDYKKA 209
            LG D  ++SW ++F+ EN+ KL +CGVA LD+  E++P  L+Y+GL  NS +P DY KA
Sbjct: 146 ALGVDT-IDSWAVLFEPENMKKLSKCGVAFLDSADEMLPAVLNYMGLNPNSTDPKDYAKA 204

Query: 210 QELLLKLRPHIAYFDSSRFISDLANGNVCVVLGWAGGVSDAQKASELAGNHRNLVYSIPR 269
           ++ LL +RP++ YF SS++I+DLANG++CV  G++G V  A+  +E A    NL Y+IP+
Sbjct: 205 EQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGDVFQAKARAEEAKKGVNLAYAIPK 264

Query: 270 EGAPVWVESMVQLNDAPNPEQGLAFINYMLRPEVIAESSNYLSYPNANKDATALVEKKIR 329
           EG  +W + +    DA N ++  AFINY+L+PEVIA+ S+Y+ Y N N  A AL+++ +R
Sbjct: 265 EGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQVSDYVGYANPNPKAGALMDQAVR 324

Query: 330 DNPGVYPSKDVLSTLFPLEPLPLKLERIRTRAWNTVKTG 368
            +  VYP ++VL  +F    LP K++R+ TR+W  VK+G
Sbjct: 325 TDAAVYPPQEVLDKMFVNSELPPKVQRLMTRSWTKVKSG 363