Pairwise Alignments

Query, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  303 bits (775), Expect = 6e-87
 Identities = 147/347 (42%), Positives = 220/347 (63%), Gaps = 3/347 (0%)

Query: 22  AEAGDAQKPSVHIYNWYDYIAPNTVKDFQKEAGVSVVYDVFDNSEVMQSKLMAGRSGYDV 81
           AE G     ++ +YNW DYI   T+ DF+K  G+ V+YD FD  E +Q+KL+ GRSGYD+
Sbjct: 23  AEVGSGN--TLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYETVQTKLLTGRSGYDL 80

Query: 82  VVASADLLPNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQSNDPGNSYAAPYLWGTTGIG 141
           V+ +A L+P LI AGV + LD+ +LP+W +LD  V+  LQ  DPG  Y+APY WG++G+ 
Sbjct: 81  VMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGLKYSAPYTWGSSGVT 140

Query: 142 YDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLDAPGEVIPIALHYLGLPYNSH 201
           Y+ DK+ + + PDAP+ S  ++F  + +++   CGV ++DAP EVIP+AL YLG    S 
Sbjct: 141 YNVDKITARM-PDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTEVIPLALQYLGKDPRSA 199

Query: 202 NPDDYKKAQELLLKLRPHIAYFDSSRFISDLANGNVCVVLGWAGGVSDAQKASELAGNHR 261
           +P D K A++LLL +RP+I  FDS  +++ L NG+VC+ L W+G  + AQ  +  A    
Sbjct: 200 SPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGDYATAQARAVEAKKDI 259

Query: 262 NLVYSIPREGAPVWVESMVQLNDAPNPEQGLAFINYMLRPEVIAESSNYLSYPNANKDAT 321
            L + IPREG+ +W +++    DAP+      FI ++L+P+ +A+ ++Y+ Y N+N  AT
Sbjct: 260 KLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAKVTDYIHYANSNAAAT 319

Query: 322 ALVEKKIRDNPGVYPSKDVLSTLFPLEPLPLKLERIRTRAWNTVKTG 368
           ALV   IR +P +YP       LF  +    +  R  TR W+TVKTG
Sbjct: 320 ALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVKTG 366