Pairwise Alignments

Query, 369 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Dickeya dianthicola ME23

 Score =  385 bits (988), Expect = e-111
 Identities = 185/368 (50%), Positives = 262/368 (71%), Gaps = 4/368 (1%)

Query: 2   KRIRYMQFALVSLFSFGVVCAEAGDAQKPSVHIYNWYDYIAPNTVKDFQKEAGVSVVYDV 61
           +R +++   L  L     V A A   ++ ++H+YNW DYIAP+T+++FQKE+G++VVYDV
Sbjct: 4   QRKKWLSGVLTGLMMAASVTASA---EEKTLHVYNWSDYIAPDTLENFQKESGINVVYDV 60

Query: 62  FDNSEVMQSKLMAGRSGYDVVVASADLLPNLIKAGVLKRLDRSKLPNWSHLDPDVLAKLQ 121
           FD++EV++ KLMAG +G+D+VV SA  L   I AGV + LD+SKLPN+ +LDP+++  ++
Sbjct: 61  FDSNEVLEGKLMAGSTGFDLVVPSASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIE 120

Query: 122 SNDPGNSYAAPYLWGTTGIGYDADKVKSLLGPDAPVNSWDLIFKEENLAKLRQCGVAMLD 181
            +DPG+ YA PYLW TTGIGY+ DKVK++LG DAPVNSWDL+ K ENL KL+ CGVA LD
Sbjct: 121 EHDPGHKYAVPYLWATTGIGYNVDKVKAILGKDAPVNSWDLVLKPENLEKLKSCGVAFLD 180

Query: 182 APGEVIPIALHYLGLPYNSHNPDDY-KKAQELLLKLRPHIAYFDSSRFISDLANGNVCVV 240
           AP E+    L+Y G   NS N  DY K A +LLLKLRP + YF SS++I+DLANG++CV 
Sbjct: 181 APAEIYATVLNYQGKNPNSANESDYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICVA 240

Query: 241 LGWAGGVSDAQKASELAGNHRNLVYSIPREGAPVWVESMVQLNDAPNPEQGLAFINYMLR 300
           +GWAG V  A   ++ A N  N+ YSIP+EGA  + +      DA N +    F+NY+L+
Sbjct: 241 IGWAGDVMQAANRAKDAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLK 300

Query: 301 PEVIAESSNYLSYPNANKDATALVEKKIRDNPGVYPSKDVLSTLFPLEPLPLKLERIRTR 360
           P+VIA  SN++ Y N NK+ATALV++++R+NP +YP  D+ + LF L+    K++R+ TR
Sbjct: 301 PDVIANVSNHVYYANPNKEATALVKEEVRNNPNIYPPADIRAKLFTLKVQSPKIDRVITR 360

Query: 361 AWNTVKTG 368
           +W  VK+G
Sbjct: 361 SWTKVKSG 368