Pairwise Alignments

Query, 386 a.a., Sensory box histidine kinase from Pseudomonas putida KT2440

Subject, 705 a.a., Sensory box histidine kinase/response regulator from Variovorax sp. SCN45

 Score =  174 bits (442), Expect = 5e-48
 Identities = 122/340 (35%), Positives = 175/340 (51%), Gaps = 38/340 (11%)

Query: 74  RPERLLCQALEQG---VAQDEGWRVR----KDGTQFWALAALDVIRDESGQIIGLAKVT- 125
           RP+      L QG   V QD G  +R    K   +   ++AL V   + G++IG+  V  
Sbjct: 225 RPDTPPGFVLSQGRPVVVQDYGKELRFSVPKAYLEAGLVSALAVPLSDRGRVIGMLSVRS 284

Query: 126 --------------RDITDRRETAQQLDAVRAQLFQAQKLEALGQLTGGLAHDFNNMLTI 171
                           ++    T+ Q       L  AQ+LE++GQLTGG+AHDFNN+LT+
Sbjct: 285 TESKRFGDEEVRFLESLSSLLATSLQRTQTEEALNHAQRLESVGQLTGGIAHDFNNLLTV 344

Query: 172 IISSARL-----ALATQDPARTQRMLQHILDASQRGTELTQQLLSFARHRKFDVASVAPA 226
           I  + ++     ALA    A  Q++L     AS+RG ELT +LL+F+R +     +V   
Sbjct: 345 IQGNLQVLEELPALAQDGYA--QQLLGAATRASRRGAELTGKLLAFSRRQVLQPVAVDTH 402

Query: 227 ELVNATRGLLEHALPSSIDLKVLLQPDLPLIEVDAGQLQMVLLNLLFNARDAIDGHGRIS 286
            L+ +   +L   L   I +++   P  PL+  D GQL+  LLN+  NARDA+   G + 
Sbjct: 403 ALLYSLADMLRRTLDQRIGIEIDTAPGRPLVVADPGQLESALLNIAINARDAMPEGGTLH 462

Query: 287 LTVDVVE-----LFGEVEGLKGS----FVRFEVEDSGEGIPTEILPRIFEPFFTTKPFGK 337
               +       L  +    +GS    FV   + DSG G+  ++  R FEPFFTTK  G+
Sbjct: 463 FRTAICGALPAILRNQRNDPQGSAAAHFVAISIADSGSGMTDDVKERAFEPFFTTKEAGR 522

Query: 338 GTGLGLSQVYGFARQSGGAICVDSEPGRGTCMRLYLPMYQ 377
           GTGLGLS VYGF  QS GA+ +DSE G+GT + LYLP  +
Sbjct: 523 GTGLGLSTVYGFVNQSRGAVAIDSEIGQGTTVTLYLPQQE 562