Pairwise Alignments

Query, 481 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 455 a.a., DNA repair protein RadA from Sphingobium sp. HT1-2

 Score = 45.8 bits (107), Expect = 3e-09
 Identities = 41/135 (30%), Positives = 61/135 (45%), Gaps = 22/135 (16%)

Query: 204 GALSGRHECLIDESGMQ---VYPRLEALFSHPSQLGSGTLA--------------RISSG 246
           G +SGR +   D+ G     V    E +FS    L  G  A              R S+G
Sbjct: 14  GTVSGRWQGQCDDCGEWNSIVEEAAETVFSAKHDLQGGGRAITLIGLDSKVELPSRTSTG 73

Query: 247 VPTFDEMLGGGLATGSVSLLMGPSGIGKTSLGLAFLGASTPQAPGLHFGFY---ETPERL 303
           +  FD  LGGG+  GS +L+ G  GIGK++L L    A+   + GL   +    E  +++
Sbjct: 74  IAEFDRALGGGIVPGSATLIGGDPGIGKSTLLLQ--AAARVASRGLTVAYISGEEASDQV 131

Query: 304 RSKAASLGYDFAAME 318
           R +A  LG   A ++
Sbjct: 132 RLRAQRLGLGNAPVQ 146



 Score = 35.8 bits (81), Expect = 3e-06
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 7   RLVTGIDGLDALLKGGLIAGASYIIQGPPGAGKTILANQLA 47
           R  TGI   D  L GG++ G++ +I G PG GK+ L  Q A
Sbjct: 69  RTSTGIAEFDRALGGGIVPGSATLIGGDPGIGKSTLLLQAA 109