Pairwise Alignments

Query, 117 a.a., Response regulator from Pseudomonas putida KT2440

Subject, 1166 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

 Score = 60.8 bits (146), Expect = 5e-14
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)

Query: 3    TILIVDDEYLIADILGFALEDEGFLVEKASNGCKALEALKEKR-VQLVITDYMMPLLNGE 61
            TIL+VDD+      L  ALE  G  VE   NG +ALE L + R + LV+ D MMP ++G 
Sbjct: 1043 TILLVDDDVRNIFALTSALEQRGAAVEIGRNGREALEKLDQVREIDLVLMDVMMPEMDGL 1102

Query: 62   ELARAIREDPALSELPVILMSGAQASQGCPALFAA----IFDKPFDMDEMIA 109
            E  R +R DP   ++PVI ++            AA       KP D++ + +
Sbjct: 1103 EATRRMRADPRFEKMPVIAITAKAMKDDREQCLAAGANDYLAKPVDLERLFS 1154



 Score = 43.9 bits (102), Expect = 6e-09
 Identities = 23/83 (27%), Positives = 47/83 (56%)

Query: 1   MNTILIVDDEYLIADILGFALEDEGFLVEKASNGCKALEALKEKRVQLVITDYMMPLLNG 60
           +  +L+V+D+ L  + +   +ED+   +    +G +ALE L+ +    +ITD  +P + G
Sbjct: 895 VKVVLLVEDDDLQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDCMITDLRLPDMQG 954

Query: 61  EELARAIREDPALSELPVILMSG 83
            +L +A+  +  +S  PVI+ +G
Sbjct: 955 SDLLKAMAAEEIVSFPPVIVYTG 977



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 2/113 (1%)

Query: 4   ILIVDDEYLIADILGFALEDEGFLVEKASNGCKALEALKEKRVQLVITDYMMPLLNGEEL 63
           +L+++DE   A IL     + G+    A       E   +     ++ D  +P   G ++
Sbjct: 775 VLVIEDEPQFAHILYDLAHELGYRCLVAHGAADGFELATQFVPDAILLDMRLPDSTGLDV 834

Query: 64  ARAIREDPALSELPVILMSGAQASQGCPALFAAI--FDKPFDMDEMIATVHQL 114
            + +++ P    +P+ ++S A  +QG      AI    KP   DE++    +L
Sbjct: 835 LQRLKDSPHTRHIPIHVVSAADNAQGAALQMGAIGYALKPTTRDELMRVFARL 887