Pairwise Alignments

Query, 341 a.a., Polyamine ABC transporter, periplasmic polyamine-binding protein from Pseudomonas putida KT2440

Subject, 345 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  217 bits (553), Expect = 3e-61
 Identities = 137/343 (39%), Positives = 187/343 (54%), Gaps = 15/343 (4%)

Query: 7   VTAVLSASLLTLACQAALAADSLNFVSWGGTTQDAQKEAWAVPFTKATNIKVVQDGPTD- 65
           +TA L+ S+ T +      A+ + FVS GG  Q+AQ +A   P  K   I + QD   D 
Sbjct: 10  MTAALALSVATAS------AEQITFVSQGGAYQEAQTKAILNPAAKLLGITINQDSAPDA 63

Query: 66  YGKLKAMVESGNVQWDVVDVEADFALRAASEGLLEPLDFNQIKRDKIDP-RFVSDHGVGS 124
           +  LK    +G   WDV+D      +R   +G++E LDF++I      P ++ + + V  
Sbjct: 64  WPVLKTQAATGKPIWDVIDAPTTICVRGGDQGMVEKLDFSKIPTAASMPAQYKTPYSVAY 123

Query: 125 FFFSFVLGYNEGKLGANKPVDWTALFDTKAYPGKRALYKWPSPGVLELALLADGVAPDKL 184
            F+S VL YN+ K  +  P  W   +D KA+PG RAL   P    +E ALLADGV  DKL
Sbjct: 124 EFYSSVLAYNKKKFASKAPQTWADFWDVKAFPGTRALRNHPQ-ATMEAALLADGVPADKL 182

Query: 185 YPLDLDRAFKKLDTIKQDI-VWWGGGAQSQQLLASGEASLGQFWNGRVYALQQDGAPVGV 243
           YPLD+DRAFKKL+ IK  I VWW  GAQS QLLA GE  +   WNGRV A+ ++GAPV  
Sbjct: 183 YPLDVDRAFKKLEQIKPHITVWWTSGAQSAQLLADGEVDMEMAWNGRVAAVMKEGAPVSF 242

Query: 244 SWKQNLVMADFLVIPKGAKNKEAAMKFLANASSAEGQAEFANKTAYAPVNVDSVA--KLD 301
           ++ Q L+    L I KGA N E A KF+  A + + QA F     Y P N  + A  K+ 
Sbjct: 243 TFNQGLLQETSLCIVKGAPNLETAYKFVNAAMTPDIQANFPAYIDYGPGNPAAYATGKIS 302

Query: 302 KDLAPNLPTA--YAQDQVTLDFAYWAK-NGQAIAARWNEWLVK 341
            + A  +P+A   A  QV +  A+WA   G+    RW  ++ K
Sbjct: 303 PERATQMPSAPENAAKQVLVSQAWWASPAGEDAIKRWAGFVQK 345