Pairwise Alignments

Query, 248 a.a., putative Cation ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 512 a.a., ribose ABC transporter - ATP-binding subunit from Pseudomonas putida KT2440

 Score = 97.4 bits (241), Expect = 5e-25
 Identities = 77/223 (34%), Positives = 107/223 (47%), Gaps = 31/223 (13%)

Query: 13  PRIDFTGIDLTLGRTRILEQVSFSVAAGSVHAIVGPNGGGKSSLIKTLLG-QMPHQGQLT 71
           P ++  GI  T G TR L+  S  VAAGSVH +VG NG GKS+LIK L G   P  G L 
Sbjct: 4   PVLELRGIVKTFGATRALDGASLRVAAGSVHGLVGENGAGKSTLIKVLAGIHRPDAGSLL 63

Query: 72  L------HWPG---EREVIGYVPQALEFDRGLPMTVDDFMAAMCQRRPAFLGLSRRVKPA 122
           L      H+     ER  IG++ Q    +R LP       A        F G  RR  P 
Sbjct: 64  LDGQPHGHFSPRQVERLGIGFIHQ----ERLLP-------ARFTVGEALFFGHERRFGPL 112

Query: 123 IDAALVQ----------VGMLDKRTRRMGALSGGERQRVLLAQGLIPEPQLLVLDEPMSA 172
           +D    Q           G+       +G LS  E+Q V + + L+ +P++LV DEP  A
Sbjct: 113 LDRRSQQREAARLLDDYFGLRLPANALIGELSSAEQQMVQIVRALLIKPRVLVFDEPSVA 172

Query: 173 LDEAGIQVFEQLLQVWRQAGTTVLWIEHDLEAVLRLADRVTGL 215
           L +  ++   +++Q  R  G  +++I H L+ +  L DRVT L
Sbjct: 173 LVQREVERLLRIVQRLRDDGLAIVYISHYLQEIEALCDRVTVL 215



 Score = 53.9 bits (128), Expect = 6e-12
 Identities = 62/240 (25%), Positives = 98/240 (40%), Gaps = 20/240 (8%)

Query: 24  LGRTRILEQVSFSVAAGSVHAIVGPNGGGKSSLIKTLLGQMPHQ-------GQ-LTLHWP 75
           LGR R  + +   V  G +  + G  G G   L+++L G  P         GQ L+L  P
Sbjct: 264 LGRARAYQGIDLQVRRGEIVGLTGLVGSGAKELLRSLFGLAPPDSGEVRLDGQPLSLRSP 323

Query: 76  GEREVIGYVPQALEFDR---GLPMTVDDFMAAMCQRRPAFLGLSRRVKPAIDAALVQVGM 132
            E    G      E  R    L ++V +        R   LGL   + PA +       +
Sbjct: 324 REAVAQGVALMPEERRRQGVALDLSVQENTTLAALSRFVRLGL---LSPARERHTTLELI 380

Query: 133 LDKRTRRMGA------LSGGERQRVLLAQGLIPEPQLLVLDEPMSALDEAGIQVFEQLLQ 186
              R +  GA      LSGG +Q+V LA+       L +LDEP   +D        +L+ 
Sbjct: 381 ERLRIKAHGAHAKVRQLSGGNQQKVALAKWFARCSSLYLLDEPSVGIDVGAKVEIYRLIG 440

Query: 187 VWRQAGTTVLWIEHDLEAVLRLADRVTGLNRQVLFDAPPAQALTPERLLGLFSVHPRSES 246
              + G  VL +  DL  ++ L DR+  ++R  +     A     +RLL + +   R+++
Sbjct: 441 ELVKEGAGVLILSSDLPELIGLCDRIHVMHRGAIAARFAAGEANSDRLLAVATGAQRAQN 500