Pairwise Alignments

Query, 308 a.a., periplasmic murein D-alanyl-D-alanine endopeptidase from Pseudomonas putida KT2440

Subject, 386 a.a., D-alanyl-D-alanine carboxypeptidase from Pseudomonas putida KT2440

 Score = 81.6 bits (200), Expect = 3e-20
 Identities = 80/278 (28%), Positives = 134/278 (48%), Gaps = 30/278 (10%)

Query: 8   LSLLLLLTGTATLPSTAAAQPPAQVQRDPSKLHLASGSALLIDLNSNQELYSSHADRVVP 67
           L +LLL+T     P+  AA+     Q  P+   LA+ S +L+D +S   L  ++ D  +P
Sbjct: 12  LPVLLLIT-----PAAFAAE-----QMTPAPPQLAAKSYVLMDASSGNVLVENNGDERLP 61

Query: 68  IASVTKLMTAMVV-LDAKL-PMDEMLTMTIANNP-EMKGVYSRVRLGSQLDRRETLLITL 124
            AS+TKLMTA +  LD +   + E   +T++ N     G    +++GSQ+   + L   +
Sbjct: 62  PASLTKLMTAYIATLDIRRGQIGESDPVTVSENAWRTGGSRMFIKVGSQVTVSDLLHGII 121

Query: 125 MSSENRAANSLANAYPGGYPAFIKAMNAKARSLGMAHTRYVEPTGL-STQNVSTARDLAK 183
           + S N A+ +LA    G   AF   MN  A  LGM ++ ++ PTGL   ++ S+A D+A 
Sbjct: 122 IQSGNDASVALAEHIAGSEDAFADMMNKTAADLGMTNSHFMNPTGLPHPEHYSSAHDMAT 181

Query: 184 LLMA-----SRKYPMLSELSTTREKTVAFRKPNYTLGFRNTDHLVNKSNWDIKLTKTGFT 238
           L  A        Y + S+           ++PN     RN   L+   +  +   KTG T
Sbjct: 182 LARAIINVDPAHYAIYSQKEFFWNN---IKQPN-----RN---LLLWRDKTVDGLKTGHT 230

Query: 239 NEAGHCLVLLTRMDNRPVAMVILDAFGKYTHFADASRM 276
           +EAG+C+V     D + +  V+     + +  A+  ++
Sbjct: 231 DEAGYCMVASAVRDGQRLIAVVFGTNSEQSRAAETQKL 268