Pairwise Alignments

Query, 208 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 210 a.a., Phage integrase from Sphingobium sp. HT1-2

 Score =  209 bits (531), Expect = 4e-59
 Identities = 108/196 (55%), Positives = 136/196 (69%), Gaps = 2/196 (1%)

Query: 13  NKGKLVGQKAPLRLKDIWAIRVRLQIAEETRDLALFDLAIDSKLKLRACDLTKLRVRDVA 72
           N G+ VG K  L+ + IWAIR  L      RD ALFDLAIDSKL    CDL K+R+ D+ 
Sbjct: 17  NAGRKVGAKRALKPRQIWAIRFFLDQHGRIRDRALFDLAIDSKLC--GCDLVKIRISDIV 74

Query: 73  HGEHVSSRAIVMQQKTQRPVQFEITEQTRLALQAWIHQAQLHSEDCLFPSRLHASVHLST 132
               + +RA V+QQKT RPVQFE+ +  R +L  W+      SED  FPSR   + H+ST
Sbjct: 75  CDRKIRTRATVVQQKTGRPVQFELMDDARASLLKWLELRCGSSEDFAFPSRTDHATHIST 134

Query: 133 RQYARMVKAWIKSIGLDPAMYGTHTMRRTKASLIYRRTKNLRAVQLLLGHTKLESTVRYL 192
           RQYAR+V  W+  IGL    YGTH++RRTKAS+IY+ T NLRAVQ+LLGHTK+ESTVRYL
Sbjct: 135 RQYARLVDEWVTGIGLPSEDYGTHSLRRTKASIIYKATGNLRAVQILLGHTKIESTVRYL 194

Query: 193 GIEVDDALEMAEQTEV 208
           G++V+DAL +AE TE+
Sbjct: 195 GVDVEDALTLAEGTEI 210