Pairwise Alignments

Query, 268 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

Subject, 276 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

 Score =  152 bits (385), Expect = 6e-42
 Identities = 91/268 (33%), Positives = 139/268 (51%), Gaps = 15/268 (5%)

Query: 1   MQFYKYHAAGNDYLVYRDCVPFDCSKPMISRIC-DRHRGLGSDGILVPVIKEGERLSVR- 58
           ++F K H  GND++V           P  ++   DRH G+G D +L+        +  R 
Sbjct: 3   LRFTKMHGLGNDFMVLDLVSQHAHILPKHAKQWGDRHTGIGFDQLLIVEAPSNPEVDFRY 62

Query: 59  -IYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAMG 117
            I+N DGS+ E+ GNG R   R++ D+ + A     + TK G++   +  +GQ IS+ MG
Sbjct: 63  RIFNADGSEVEQCGNGARCFARFVLDKRLTAKRQIRVETKSGVIELDIRSDGQ-ISVNMG 121

Query: 118 QAAFA----------NTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPLI 167
                            A++ +DVDG  +++  VSMGNPH V+ V+        +LGP I
Sbjct: 122 APRLVPADIPFQAPEQAASYALDVDGKTVEIAAVSMGNPHAVLRVNDINNAPVHELGPKI 181

Query: 168 ERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRVA 227
           E    FP R NV F++VIDR   ++++WERG G T + GT +CAAA  +   G +   + 
Sbjct: 182 EHHPRFPARVNVGFLQVIDRTRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPLL 241

Query: 228 VNMAGGVIMIELDDDYH-VLMQGPVCRV 254
           +++ GG + IE     H V+M GP  RV
Sbjct: 242 IDLPGGRLSIEWAGPGHPVMMTGPASRV 269