Pairwise Alignments

Query, 268 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

Subject, 267 a.a., diaminopimelate epimerase from Pseudomonas simiae WCS417

 Score =  113 bits (283), Expect = 4e-30
 Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 17/261 (6%)

Query: 1   MQFYKYHAAGNDYLVYRDCVPFDCSKPMISR-ICDRHRGLGSDGILVPVIKEGERLSVRI 59
           + F K HA G+D+++       D     ++R + +RH G+G + + V +  +     ++ 
Sbjct: 3   LPFVKMHAHGDDFIIIDRRGLHDPITAKVARQLGNRHTGIGFNQLAVLLDCDDAAARIKF 62

Query: 60  YNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEI-STKGGIVTCQVLDNGQRISIAMGQ 118
           +N +G+     G+  R +   L  +   AG+   +  T  G++TC     G++IS+ MG+
Sbjct: 63  WNPNGTLLATCGSATRGVADRLMHE---AGTDSVVLRTDRGLLTC-ARAAGRQISVNMGE 118

Query: 119 AAFANTAA--------FTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPLIERL 170
            +   +A          T+ +DG P      SMGNPHC  FV+  T      +GP +E  
Sbjct: 119 PSLDWSAVPLAEAMDTLTLPIDGNPAAC---SMGNPHCTFFVEDLTAVDVATVGPALEIH 175

Query: 171 SIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRVAVNM 230
            +FP +TNV FV+V+DR  + ++IWERG G  L SG+  C A     R GL+   V V+ 
Sbjct: 176 PLFPAKTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGLLDATVQVHC 235

Query: 231 AGGVIMIELDDDYHVLMQGPV 251
            GG + +    +  V++ G V
Sbjct: 236 DGGTVTVHWAGEGAVVLTGSV 256