Pairwise Alignments

Query, 268 a.a., diaminopimelate epimerase from Pseudomonas putida KT2440

Subject, 270 a.a., Diaminopimelate epimerase (EC 5.1.1.7) from Sphingobium sp. HT1-2

 Score =  120 bits (300), Expect = 4e-32
 Identities = 84/267 (31%), Positives = 130/267 (48%), Gaps = 24/267 (8%)

Query: 2   QFYKYHAAGNDYLVY-RDCVPFDCSKPMISRICDRHRGLGSDGILVPVIKE-GER--LSV 57
           +F K H  GND++V      P   ++     I DRH G+G D ++V    E G++  +S+
Sbjct: 4   RFSKMHGLGNDFVVIDARQAPVAMTEARARAIADRHAGIGCDQLIVIGDAEAGDQADVSM 63

Query: 58  RIYNTDGSQAEKSGNGLRILCRYLWDQNIVAGSPFEISTKGGIVTCQVLDNGQRISIAMG 117
            I+N+DGS+ E  GN  R +  ++       G    I T+ G++  + +D G   S+ MG
Sbjct: 64  LIFNSDGSEVEACGNATRCVPLFV-------GKDVLIRTRAGLLDAKGVDGGA--SVDMG 114

Query: 118 QAAF----------ANTAAFTVDVDGTPLQLHPVSMGNPHCVVFVDQPTETLARQLGPLI 167
              F           +T   +   +  P     V++GNPH + FV+        +LGPLI
Sbjct: 115 APRFDWDAIPLAYPMDTLTMSASWEDLPAPA-AVNVGNPHVIFFVEDLDAVDFERLGPLI 173

Query: 168 ERLSIFPDRTNVQFVRVIDRQTLEVQIWERGVGYTLSSGTSSCAAAAVSRRLGLVGPRVA 227
           E   +FP R NV F +V+  Q L + +WERG G T + GT +CA A  + R  L+   V 
Sbjct: 174 EHDPLFPARVNVNFAQVVGPQHLRLIVWERGAGLTRACGTGACATAVAAIRRKLMAGPVT 233

Query: 228 VNMAGGVIMIELDDDYHVLMQGPVCRV 254
           V++ GG + I+      + M GP   V
Sbjct: 234 VSLPGGDLEIDWAPGSTIRMTGPATHV 260