Pairwise Alignments

Query, 406 a.a., putative Efflux transporter from Pseudomonas putida KT2440

Subject, 392 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  207 bits (526), Expect = 6e-58
 Identities = 133/381 (34%), Positives = 210/381 (55%), Gaps = 13/381 (3%)

Query: 12  PHSPLHSLLLGSLLHDASKGIASPLMVLLLTTRFGLNSWQTGALLGISMLLATLMSLPAG 71
           PH+ +  LL  +     ++ +  P +V+ L   F L   Q G L+G ++++A+L+SL  G
Sbjct: 9   PHT-VRLLLTTTFTLTVARALTLPYLVVYLADNFQLPISQIGLLIGGALIVASLLSLYGG 67

Query: 72  LLFDRFARLHLATITLLLMTLAVGLLPFAQIILLVSLLLVFMEFAAALFGIGLKALLADF 131
            L D  +   L + + LL  LA      ++  L     LV +  A A+  I  KA     
Sbjct: 68  HLVDTLSNHTLVSASTLLFALAFVGAVASRSALPFFFCLVLINLALAVVDIAAKAGFCAL 127

Query: 132 VSVKQRVSAFSYRYILTNVAFAIGPVLGVRLAEVSLTLALLVAAGACGAAMVVMMCLGAS 191
           + V +R   F+ +Y L+NV +A GP+LGV + E++  +  L +A      + + MCL   
Sbjct: 128 LPVDERAEVFAIKYTLSNVGYAAGPLLGVAMLELNDHVPFLASA-----LLGLAMCLAYW 182

Query: 192 QGQPRTSLKTGAPS-----LADALKVLGNDRNLVLYTLGSFFNTVVHGRFTFFLSLWLLY 246
           +   R SL+  AP             L  DR LV +T+G   + VV G+FT +LS +L+ 
Sbjct: 183 RLGDR-SLQASAPDKPAAGFGQVALGLARDRRLVCFTVGGVLSAVVFGQFTAYLSQYLVV 241

Query: 247 QYPANQGMEMLSWLLLTNAITVIALQRLVSRYITLETLNSRVMMGALLFSIGLLGFSVSE 306
                +   ++ +L+ TNA+TVIALQ L+ R I+ + L   ++ G  LF  GLLGF+++ 
Sbjct: 242 TSNPAEAARLIGYLVTTNAVTVIALQYLIGRRISRQRLMPWLLAGMGLFIAGLLGFALAG 301

Query: 307 QLTAWCLSMLVFTLGELLIQPAEYLYIDSISPPPLKGSYFAAHNLASLGAAVSPAWCGFI 366
            + AWCL+MLVFTLGE+++ PAEY++ID I+P  L+G Y+ A NL++LGAA+ P   GF 
Sbjct: 302 SVLAWCLAMLVFTLGEIIVIPAEYMFIDLIAPEHLRGVYYGAQNLSNLGAALGPVMVGFA 361

Query: 367 LSLAGPQGLCFSLI-ACVLAG 386
           L    P  + + L+ + +LAG
Sbjct: 362 LVHLWPGAVFYLLVLSVILAG 382