Pairwise Alignments
Query, 517 a.a., putative Non-ribosomal peptide synthetase from Pseudomonas putida KT2440
Subject, 4679 a.a., peptide synthase from Pseudomonas simiae WCS417
Score = 230 bits (586), Expect = 1e-63
Identities = 163/500 (32%), Positives = 233/500 (46%), Gaps = 15/500 (3%)
Query: 13 AYPVHFSLVEYIERIIHRYPSNAAAFDEDQRLTYSELRIELLTLHARLHELGVRSGDVVA 72
AYP + +E + P A LTY++L L L E GV +V
Sbjct: 506 AYPTERGIHHLVEDQVQATPDAPALVFGTTTLTYAQLDARANQLAHALREKGVAPDVLVG 565
Query: 73 VNATVQLRYPVVVLGLLLAGLVYLPIAAALPPERKRAICEQARPALMITDEQK----PDD 128
+ + V +L +L AG Y+P+ P ER + E + L+++ P +
Sbjct: 566 ICIERSIEMVVGLLAILKAGGAYVPLDPEYPQERLAYMIEDSGIQLLLSQHSLLPVLPVE 625
Query: 129 AIPTCTLSSLFSGKPVGAAFDLFPEPSPEATAYLIFTSGSTGVPKGVSITRKGFFNRLQW 188
I L S +A AY+I+TSGSTG PKG + + NRL W
Sbjct: 626 GIQVIALDQPASWLDGYSAESANVSLHALNLAYVIYTSGSTGKPKGAGNSHRALVNRLCW 685
Query: 189 AQDYYALGSEDVTALKTQASFDPSIQEAVLPFFSAGAVFVPDHNRVNFPNYLSACIAEHG 248
Q Y L + D KT SFD S+ E P + + V P L I HG
Sbjct: 686 MQQAYGLDARDAVLQKTPFSFDVSVWEFFWPLMTGARLVVAAPGEHREPARLIETIGRHG 745
Query: 249 VTMLIMVPSHLQHLLASPAINACQHLRHIVCCGEPWGVELISALHQRLPNCRIYNGYGPT 308
+T L VPS LQ + P + AC L+ IVC GE ++ + +LP ++N YGPT
Sbjct: 746 ITTLHFVPSMLQAFIHEPGVQACTSLQRIVCSGEALPLDAQLQVFAKLPQAGLFNLYGPT 805
Query: 309 EATIGTLVFNPPRGYASDVIPIGKPIAGTHVCIVDEDLQPVPTGEAGELIIGGICVGDGY 368
EA I + +D +PIG+PIA ++D L PVP G +GEL +GGI + Y
Sbjct: 806 EAAIDVTHWTCV-DEGADSVPIGRPIANLGTYVLDAQLNPVPAGVSGELYLGGIGLARSY 864
Query: 369 LNNAPLTEQRFRRLQVEGAGEVRFYLSGDVARALPTGDIVFLGRRDNQVKINGVRIELEE 428
LT +RF + R Y +GD R G I +LGR D+QVK+ G+RIEL E
Sbjct: 865 HRRPALTAERF--VPSPFGDGARLYRTGDRVRQRADGVIEYLGRLDHQVKLRGLRIELGE 922
Query: 429 IELALRNCPGVRDAIVVKRKGKVSDELHAFLIAH--MPLDIQAITTSCARRIGQATTPSR 486
IE L P VR+A+V+ + GK +L A+L+ P+D++A S + + PS
Sbjct: 923 IETRLMQHPSVREAVVLVQGGK---QLVAYLVLEDTAPVDLKAWLLS---SLPEYMVPSH 976
Query: 487 FSQVEAFPLNQSGKVDRRAL 506
+ P+ +GK+DR+AL
Sbjct: 977 MVPLAKLPVTANGKLDRKAL 996
Score = 189 bits (479), Expect = 3e-51
Identities = 157/510 (30%), Positives = 240/510 (47%), Gaps = 25/510 (4%)
Query: 26 RIIHRYPSNAAAFDE-------DQRLTYSELRIELLTLHARLHELGVRSGDVVAVNATVQ 78
R+ R + AAA + D RL+Y++L L RL LGV G V + A
Sbjct: 1986 RVHERIAAQAAATPDALAVQAGDARLSYAQLNDHANRLAHRLLALGVGPGQRVGLAARRG 2045
Query: 79 LRYPVVVLGLLLAGLVYLPIAAALPPERKRAICEQARPALMITDEQKPDDAIPTCTLSSL 138
+ V +L +L +G Y+P+ P ER + +R L++++ D +P +
Sbjct: 2046 PQLIVSLLAVLKSGAAYVPLDPNYPTERLAYMLADSRLDLLLSETGLLAD-LPLPQGLAR 2104
Query: 139 FSGKPVGAAFDLFPEPSPEA------TAYLIFTSGSTGVPKGVSITRKGFFNRLQWAQDY 192
GA +P P AY+I+TSGSTG+PKGV+I A+ Y
Sbjct: 2105 LDFTASGAELADYPSTPPANHAAAADLAYVIYTSGSTGLPKGVAIDHAALSQFCDSAEAY 2164
Query: 193 YALGSEDVTALKTQASFDPSIQEAVLPFFSAGAVFVPDHNRVNFPNYLSACIAEHGVTML 252
L + D SFD +++ P GA + + + L+ I E GVT L
Sbjct: 2165 SRLSASDRVLQFATFSFDGFVEQCYPPL-CVGAALIMRGDELWDAGQLAREIVEQGVT-L 2222
Query: 253 IMVPSHLQHLLASPAI---NACQHLRHIVCCGEPWGVELISALHQR-LPNCRIYNGYGPT 308
+P+ +LLA +LR + GE VE + A H L R+ N YGPT
Sbjct: 2223 ADLPAAYWYLLAKECAVDRRTLGNLRQVHVGGEAMSVEGLRAWHTAGLGGVRLVNTYGPT 2282
Query: 309 EATIGTLVFNPPRGYASDV--IPIGKPIAGTHVCIVDEDLQPVPTGEAGELIIGGIC-VG 365
EAT+ + V + ASD +PIG+ I G + ++D + + + GEL IG +
Sbjct: 2283 EATVVSSVHDCQLADASDAFGVPIGRAIEGRALYVLDSGFELLASDGVGELCIGAEHGLA 2342
Query: 366 DGYLNNAPLTEQRFRRLQVEGAGEVRFYLSGDVARALPTGDIVFLGRRDNQVKINGVRIE 425
Y + LT +RF R Y SGD+AR G + ++GR D+QVKI G R+E
Sbjct: 2343 QCYFDRPALTAERFLPDPFSAVPGARLYRSGDLARYNEAGALEYVGRIDHQVKIRGFRVE 2402
Query: 426 LEEIELALRNCPGVRDAIVVKRKGKVSDELHAFL--IAHMPLDIQAITTSCARRIGQATT 483
+ EIE +L+ P +R+A V+ + +L A++ + LD QA+ + + +
Sbjct: 2403 MGEIEASLQALPSLREAAVIAQPSATGTQLVAYVVPVTAQTLDPQALAATLRQSLPDYMV 2462
Query: 484 PSRFSQVEAFPLNQSGKVDRRALAATLMNQ 513
P ++ +EA PLN +GK+DRRAL A +NQ
Sbjct: 2463 PGQWVILEALPLNNNGKLDRRALPAPDLNQ 2492
Score = 187 bits (475), Expect = 7e-51
Identities = 151/481 (31%), Positives = 224/481 (46%), Gaps = 19/481 (3%)
Query: 32 PSNAAAFDEDQRLTYSELRIELLTLHARLHELGVRSGDVVAVNATVQLRYPVVVLGLLLA 91
P A + Q L+Y EL L RL GV +VAV+ L + +L L A
Sbjct: 3051 PDALALQFKGQALSYGELNRRANRLAHRLIAAGVGPDVLVAVHVERSLDMVIGLLATLKA 3110
Query: 92 GLVYLPIAAALPPERKRAICEQARPALMITDEQKPDD-AIPTCTLSSLFSGKPVGAAFDL 150
G Y+P+ P +R + E +R +++T A P + D
Sbjct: 3111 GGAYVPLDPQFPADRLAFMLEDSRARVLLTQSHLDGSLAHPQGVQVLMVEADDNAVEHDP 3170
Query: 151 FPEPSPEATAYLIFTSGSTGVPKGVSITRKGFFNRLQWAQDYYALGSEDVTALKTQASFD 210
+PE AY+I+TSGSTG PKGV + + + +G++ T SFD
Sbjct: 3171 QVNVTPEHLAYVIYTSGSTGTPKGVMVRHEALCSFTCGMAGTLDIGADARVLSLTTFSFD 3230
Query: 211 PSIQEAVLPFFSAGAVFVPDHNRVNFPNYLSACIAEHGVTMLIMVPSHLQHLLASPAINA 270
E +P V + P + + +L PS + LL SP
Sbjct: 3231 IFALELYVPLTVGATVLLSGQELALDPEAIIDLVHSQCANVLQATPSTWRMLLESPR--- 3287
Query: 271 CQHLRHIVC-CGEPWGVELISALHQRLPNCR--IYNGYGPTEATIGTLVFNPPRGYASDV 327
Q LR I C CG G L S L QRL + + ++N YGPTE TI + R + +
Sbjct: 3288 AQLLRGIKCLCG---GEALPSDLAQRLLDLQGPLWNLYGPTETTIWSAAH---RLHEAQP 3341
Query: 328 IPIGKPIAGTHVCIVDEDLQPVPTGEAGELIIGGICVGDGYLNNAPLTEQRFRRLQVEGA 387
+ +G+PIA T + I++ L P P G AGEL+IGG+ + GY LT +RF
Sbjct: 3342 L-VGRPIANTALFILNAGLTPSPVGAAGELLIGGVGLARGYHERPALTAERFVPNPYGAP 3400
Query: 388 GEVRFYLSGDVARALPTGDIVFLGRRDNQVKINGVRIELEEIELALRNCPGVRDAIVVKR 447
GE R Y +GD+AR G + ++GR D+QVK+ G RIEL E+E LR G+R+A+V+
Sbjct: 3401 GE-RLYRTGDLARYRADGVVEYIGRVDHQVKVRGFRIELGEVEACLREQAGIREAVVLAD 3459
Query: 448 KGKVSDELHAFLIAHMPLDIQAITTSCARRIGQATTPSRFSQVEAFPLNQSGKVDRRALA 507
+D L A+L++ P + + R+ P+ +++ PL +GK+DR+AL
Sbjct: 3460 ----NDRLIAYLVSSAPDAPEVYKAALRERLPDYMVPAHLMFLDSLPLTPNGKLDRKALP 3515
Query: 508 A 508
A
Sbjct: 3516 A 3516
Score = 160 bits (405), Expect = 1e-42
Identities = 144/518 (27%), Positives = 224/518 (43%), Gaps = 36/518 (6%)
Query: 25 ERIIHRYPSNAAAFDED--------QRLTYSELRIELLTLHARLHELGVRSGDVVAVNAT 76
+R++H ++ A + D Q L+Y EL + L L GV VA+
Sbjct: 4070 KRLVHELVADRARENPDAVAVKFDAQTLSYGELDRQANRLAHALIARGVGPDVRVAIAMP 4129
Query: 77 VQLRYPVVVLGLLLAGLVYLPIAAALPPERKRAICEQARPALMITDEQKPDDAIPTCTLS 136
V L ++ AG VY+P+ P +R + + +R L++T + L
Sbjct: 4130 RSAEIMVAFLAVMKAGGVYVPLDIEYPRDRLLYMMQDSRAQLLLTHTRALQQLPIPDGLD 4189
Query: 137 SLFSGKPVGAAFDLFPEPSPEAT------AYLIFTSGSTGVPKGVSITRKGFFNRLQWAQ 190
SL + A F + +P+ AY+I+TSGSTG+PKGV+++ +
Sbjct: 4190 SLAIDRTEEWAG--FSDTAPQVKLGGDNLAYVIYTSGSTGMPKGVAVSHGPLVAHIIATG 4247
Query: 191 DYYALGSEDVTALKTQASFDPSIQEAVLPFFSAGAVFVPDHNRVNFPNYLSACIAEHGVT 250
+ Y D +FD S + + P + +V + D + + P Y + H VT
Sbjct: 4248 ERYETSPADCELHFMSFAFDGSHEGWMHPLINGASVLIRDDS-LWLPEYTYQQMHRHHVT 4306
Query: 251 MLIMVPSHLQHLLASPAINACQHLRHIVCCGEPWGVELISALHQR-LPNCRIYNGYGPTE 309
M + P +LQ L + + C G + L R L ++NGYGPTE
Sbjct: 4307 MAVFPPVYLQQLAEHAERDGNPPKVRVYCFGGDAVAQASYDLAWRALKPTYLFNGYGPTE 4366
Query: 310 ATIGTLVFNPPRGYASDVI--PIGKPIAGTHVCIVDEDLQPVPTGEAGELIIGGICVGDG 367
+ L++ +G + PIG + ++D L P G AGEL +GG V G
Sbjct: 4367 TVVTPLLWKARKGDPCGAVYAPIGTLLGNRSGYVLDAQLNLQPIGVAGELYLGGEGVARG 4426
Query: 368 YLNNAPLTEQRFRRLQVEGAGEVRFYLSGDVARALPTGDIVFLGRRDNQVKINGVRIELE 427
YL LT +RF G R Y SGD+ R P G + +LG +QVKI G RIEL
Sbjct: 4427 YLERPALTAERFVPDPFGKPGS-RVYRSGDLTRGRPDGGVDYLGSVAHQVKIRGFRIELG 4485
Query: 428 EIELALRNCPGVRDAIVVKRKGKVSDELHAFLIAHMPLDI---------QAITTSCARRI 478
EIE LR V + +VV +G +L A+++ P D ++ + +
Sbjct: 4486 EIEARLREQDNVGETVVVAHEGPTGKQLVAYVV---PADTLLADETEFRDSLRRALKTHL 4542
Query: 479 GQATTPSRFSQVEAFPLNQSGKVDRRALA---ATLMNQ 513
P+ F + PL +GK+DR+ L A+L+ Q
Sbjct: 4543 PDYMVPTHFMFLAQMPLTPNGKLDRKGLPEPDASLLQQ 4580