Pairwise Alignments

Query, 310 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 303 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 83.2 bits (204), Expect = 7e-21
 Identities = 67/257 (26%), Positives = 113/257 (43%), Gaps = 9/257 (3%)

Query: 3   LKFRHIEIFKAIMITGTVTGAAQLLETSQPTISRELSNFESSIGMMLFERHKGRLKPTAQ 62
           +  R I  F A+  TG+++ AAQ    SQ T++  +   E  IG+ LF RH   +  T Q
Sbjct: 2   MTLRQIRHFIAVAETGSISAAAQTAFISQSTLTLAIQQLEQEIGVNLFNRHAKGMTLTHQ 61

Query: 63  GMALHSEILKAYDGLARVSAAAKIIKLGLREKVSVLSLPVLSQT---ILPASLARFMEIY 119
           G   H  + +A+  LA V  A + ++    +    L++ V S      L   L RF   Y
Sbjct: 62  G---HQFLRQAHLILATVDNAKRSLQQSTDQVAGQLTIGVTSLVAGYYLADLLTRFQRAY 118

Query: 120 PDINLSLSTHDSPDIEPLISSQAYDIG--LIEGVSAPMGTTTEHLTDVDEVCVLPPGHPL 177
           P++ + +   + P IE L+ S   D+G  ++  +       TE LT       LP  HPL
Sbjct: 119 PNVEIRVMEDERPYIEHLLVSGEIDVGVLILSNLEDRHALQTEVLTHSPHRLWLPAQHPL 178

Query: 178 SAFTHIDPRQLSQYPFIHLAPNDPYRHQLDSVFAQLGVSRSSIIEVDNAATICQMVLSGI 237
                I+   +++ P I L   D   H    ++   G+     +   +   +  +V +G+
Sbjct: 179 LEHDSINLADVAREPLIQLNV-DEMGHNAQRMWTSAGLQPRVTLRTASTEAVRSLVAAGL 237

Query: 238 GVSIINPLVANTYASQG 254
           GVSI   +    ++ +G
Sbjct: 238 GVSIQPDMTYRPWSLEG 254