Pairwise Alignments

Query, 310 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 312 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  145 bits (367), Expect = 9e-40
 Identities = 87/289 (30%), Positives = 145/289 (50%), Gaps = 4/289 (1%)

Query: 6   RHIEIFKAIMITGTVTGAAQLLETSQPTISRELSNFESSIGMMLFERHKGRLKPTAQGMA 65
           R IE+F+++M  G+ + AA LL  +QP IS+ L   E + G  LF R +GRL+PT +  A
Sbjct: 4   REIEVFRSVMSVGSASKAAALLGVTQPAISQSLRRLEEAAGFPLFRRLRGRLQPTPEAQA 63

Query: 66  LHSEILKAYDGLARVSAAAKIIKLGLREKVSVLSLPVLSQTILPASLARFMEIYPDIN-- 123
           L  E+ + + GL+ +    + +K      + +   P    T +P  L+R +    D    
Sbjct: 64  LLVEVERVFVGLSSIEHRMRSLKRFGVNTLRMAVYPAFGLTFVPRVLSRLVSERRDSEDR 123

Query: 124 --LSLSTHDSPDIEPLISSQAYDIGLIEGVSAPMGTTTEHLTDVDEVCVLPPGHPLSAFT 181
             +SL    S ++   +  +  D GL+       G           V V+   H L+   
Sbjct: 124 PQISLQVLSSREVHEAVLGRQVDFGLMADEMPTTGLEHSEFARFPGVVVMHAKHRLTKAR 183

Query: 182 HIDPRQLSQYPFIHLAPNDPYRHQLDSVFAQLGVSRSSIIEVDNAATICQMVLSGIGVSI 241
            I P QL++ PF+ L P D  R +L+   A+  V  S ++E   AA++C+M LSG+G+  
Sbjct: 184 TIQPHQLAEEPFLALNPEDASRRRLERALAECNVGLSVLVETPYAASVCEMALSGMGIGF 243

Query: 242 INPLVANTYASQGLTIRRLTVSVPFSISLVRPLQRGASLVVDHLVECIR 290
           +NP+ A  YA +GL IR L++ V F+  L+ P  +  S +   +++ +R
Sbjct: 244 VNPVTAMEYAQRGLVIRPLSLEVSFAGVLLLPPGQPLSGLASRVLQLMR 292