Pairwise Alignments

Query, 310 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 313 a.a., Cys regulon transcriptional activator CysB from Variovorax sp. SCN45

 Score = 86.7 bits (213), Expect = 7e-22
 Identities = 68/262 (25%), Positives = 116/262 (44%), Gaps = 12/262 (4%)

Query: 2   QLKFRHIEIFKAIMITGTVTGAAQLLETSQPTISRELSNFESSIGMMLFERHKGRLK--- 58
           Q KF    + +A+     +T AA+ L TSQP +S+ +   E  +G+ +F RH  RLK   
Sbjct: 5   QFKF----VQEAVRRNLNLTEAAKALHTSQPGVSKAIIELEEELGVEIFARHGKRLKRVT 60

Query: 59  -PTAQGMALHSEILKAYDGLARVSAAAKIIKLGLREKVSVLSLPVLSQTILPASLARFME 117
            P    +A    I++    L R+         G    +S+ +    ++ +LP  +A   E
Sbjct: 61  EPGQHVIASIELIMREVGNLKRIGEQFSAQDSGT---LSIATTHTQARYVLPVPVANLRE 117

Query: 118 IYPDINLSLSTHDSPDIEPLISSQAYDIGLI-EGVSAPMGTTTEHLTDVDEVCVLPPGHP 176
            YP +N+SL       +  ++  +  +IG+  E +       T    +   V VLP  HP
Sbjct: 118 AYPKVNVSLHQGSPDQVARMVIDEIAEIGIATESLDGYAELVTLPCYEWQHVLVLPKDHP 177

Query: 177 LSAFTHIDPRQLSQYPFIHLAPNDPYRHQLDSVFAQLGVSRSSIIEVDNAATICQMVLSG 236
           L+A   I    L+  P I   P+   R ++D  FAQ  ++    +E  ++  I   V  G
Sbjct: 178 LAAKERISLEDLASEPIITYHPSFTGRTRIDHAFAQKKLTPRIALEAIDSDVIKTYVRLG 237

Query: 237 IGVSIINPLVANTYASQGLTIR 258
           +GV I+  +     ++  L +R
Sbjct: 238 LGVGIVAEMAVRDESNADLVVR 259