Pairwise Alignments

Query, 304 a.a., putative permease (RarD protein) from Pseudomonas putida KT2440

Subject, 293 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 72/286 (25%), Positives = 141/286 (49%), Gaps = 16/286 (5%)

Query: 11  GLSAALASNCLLGLSSLYWKALAALPALALLGCRVLMSLLCVTLLLAARKE------LVP 64
           G+  ++ ++ L  +   +   L  L  L + G R+L+++ C+T+ +    E      L+ 
Sbjct: 4   GVVLSVLASVLFAVMYYFTSLLTPLSGLEIFGWRMLLTVPCMTVFMIVSGEWRRVWELLQ 63

Query: 65  LLCVLKRRDIALHGAAAVLVAGNWGTFIWASIHGHVLESGLGYLIAPVLGISLGLLLYQE 124
           LL    R    +  ++A+L    W  F+WA ++G  L+  +GY + P+  +  G L++ E
Sbjct: 64  LLAAKPRLIAGVLLSSALLGVQLW-LFMWAPLNGRSLDVSVGYFLLPLTMVLTGRLVWGE 122

Query: 125 RLSVPRGLSLTMVIGSVVYLLFEKGGLDSRVFLVIGVTWGTYTWLKKLARLPPWSGLFLE 184
           +LS  + +++      V+  L++ GG  S   LV+ + +  Y  ++K  +     GL+L+
Sbjct: 123 QLSYLQRIAVFFAALGVLNELYQAGGF-SWATLVVIIGYPVYFIVRKYLKTDHLGGLWLD 181

Query: 185 SLVLGVLLMPLILW-VSTPVAGIAALGSADT--ALLLLCGAVSLLPLALFSFAARRLPLS 241
                 L++P+  W V +   G A + +     AL+ + G +S   L  +  A+R L  S
Sbjct: 182 M----ALMLPVAWWFVQSGEQGFAVMDAHPKLYALIPMLGLISASALVSYIIASRLLAFS 237

Query: 242 VMGLMQFVLPLTQFFVALMFYGQIPSHGAMLAFALIALAMLLVILE 287
           + GL+ +V P+    VAL+  G+    G  L +  I LA+++++ E
Sbjct: 238 LFGLLSYVEPVLLLAVALIL-GEGIKGGEWLTYIPIWLAVMVLVFE 282