Pairwise Alignments

Query, 224 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 221 a.a., alginate lyase from Pseudomonas simiae WCS417

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 45/190 (23%), Positives = 85/190 (44%), Gaps = 21/190 (11%)

Query: 46  SIQFSAPTKGASSKSTHRTRCEWTET------QDWTLASAQDHWNRQTMTLTKVNSAQKV 99
           ++QF  P  G  +++    R E  ET      ++WT   A D++ R T+ + +V S  K+
Sbjct: 40  NVQFWTPVTGTRTENAVYPRSELRETYADGRLRNWTYPDA-DNFLRATLAVNQVPSTGKI 98

Query: 100 VIAQMHVRGDDGPPVKVFW------NKGNITLGFRRTFNQTDPVNSTVLKGVPLGATFNI 153
           VI Q+H      P +K+ +        GNI    R   ++ +     V   VPL  +F  
Sbjct: 99  VIGQIHAYDSQKPLIKLEYQFKEKTQTGNIVAKVRMRPDEDEGRVIIVASNVPLEKSFTY 158

Query: 154 SIHTTSEGVVTVTAECNGVSASSGDLQLDSTWASRLFEFHGGVYNQVDYTDATPAEDGSI 213
            I+    G+++V A     +    + ++ + W ++   F  G Y Q +  D   +++G+ 
Sbjct: 159 VINLNKAGLLSVYA-----ADGEWNERIGAAWGAKPLYFKAGAYVQDNSGD---SKEGAR 210

Query: 214 CIISELSLIH 223
              ++L + H
Sbjct: 211 VTFAKLDIDH 220