Pairwise Alignments

Query, 273 a.a., putative shikimate 5-dehydrogenase from Pseudomonas putida KT2440

Subject, 298 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  101 bits (251), Expect = 2e-26
 Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 23/283 (8%)

Query: 9   TVLCISLA-GRPGTFGVRFHNHLYQQLGLDFYYKAM-------RTDDLPAAVAGIRALGI 60
           ++LC  +  G  G+     H    + LGL   Y+ +       R DDLP  +  + A+G 
Sbjct: 15  SILCGLIGQGIAGSRSPHMHETEAKALGLTLVYRILDADRMGYRADDLPRLLPMLGAMGF 74

Query: 61  RGCGVSMPYKEACMALVDEIDPSAAAIESVNTLVNCNGHLKAYNTDYLAVR-QLLAQHQV 119
            G  V+ P+K+A + L+D +  +A A+ +VNT++  NG     NTD+   R   LA    
Sbjct: 75  DGINVTHPFKQAVIPLLDSLSDAARALGAVNTILFRNGQAHGDNTDWSGYRAHFLAGLAD 134

Query: 120 DPGTAFALRGSGGMAKAVASALRDAGFAEGIIVARNEQAGRQLADVCG-------YRWVP 172
            P    A+ G+GG A AV  A  D G     IV   ++    LAD  G        + + 
Sbjct: 135 RPRGRIAMIGAGGAAAAVGYAHLDLGATHLAIVDPAQERAAALADRLGALFPAARVQAMA 194

Query: 173 EPGDICPPM--LVNVTPIGMAGGLEAEELAFPEHAIAAAERVFDVVAMPAQTPLIRRAQA 230
              D       +V  +PIGM   L    L F    +   + V D++  P  TPL+  AQA
Sbjct: 195 HAADAIADADGVVQTSPIGM---LSHPGLPFDPDLLTPDQWVSDIIYFPLHTPLLVAAQA 251

Query: 231 LGKPVITGLEVIALQALEQFVLYTGVRPTREQVDAAVAYARAT 273
            G  ++TG  +  +QA   F L+T V P  +++ A   +ARAT
Sbjct: 252 KGCAILTGGGMAVMQAAHAFALFTSVAPDCDRMLA--DFARAT 292