Pairwise Alignments

Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  203 bits (516), Expect = 4e-56
 Identities = 145/442 (32%), Positives = 223/442 (50%), Gaps = 41/442 (9%)

Query: 443 AELEQTNEQLSERTEALDRKNDELSQAQLELQARADDLQRSSKYKSEFLANMSHELRTPL 502
           +EL      ++    AL++ +DE  QA  EL    ++ +++++ KS+FLA MSHELRTP+
Sbjct: 221 SELGHLARHINNLASALEQASDEQKQAIAELIQAREEAEQANRAKSDFLAMMSHELRTPM 280

Query: 503 NSSLILAKLLAENAEGNLSEEQVKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPET 562
           N  L + +LL       LS EQ  +      +   LL +INDILD +++E   L++    
Sbjct: 281 NGVLGMLQLLETTP---LSSEQADYTAVASESTGHLLKVINDILDFSRIERAALQLEHID 337

Query: 563 TQVERLVEGLRGMFQPLAGHKGLAFEVKVEPQVP-VTLFTDRQRLEQILKNLLSNAIKFT 621
             +  L+      FQ  A  +GL   +++   +  + +  D  R+ QIL NL+ NA+KFT
Sbjct: 338 FNLGELITNSVQSFQHSAQQRGLGLHLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFT 397

Query: 622 ERGQVSMNVSFQA-DSGIVF---AVRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTGL 677
           ERGQV ++  +Q  D  +++   +VRDTGIGI +D+ + +F AF Q D + +RRYGGTGL
Sbjct: 398 ERGQVQVDARWQVLDRQLIWLTCSVRDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGL 457

Query: 678 GLSISRDLAHLLGGQINVDSSPGQGSVFSLILPERYAAEAEDVEPQSLRPAVDALPPAPQ 737
           GLSI+R LA  +GG++  +S  G GS F+L +P   A  A    P  L P          
Sbjct: 458 GLSIARTLAERMGGKLRGESREGLGSTFTLEMPLALANPA----PVPLTP---------- 503

Query: 738 APLAAAVTRPAPAFADDRERAPFDTRCILVIEDEPNFARILFDLAHELGYSCLVAHGADE 797
            P     T P             D   +L++ED P    ++  +   LG +   A    E
Sbjct: 504 -PTTVRTTVP-------------DNDQVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLE 549

Query: 798 GFELAAQYIPDAILLDMRLPDHSGLTVLQRLKEQASTRHIPVHIISVE----DRVEAAMH 853
             EL  +    A+L+D RLP   G    +R+++  +   +P+  ++      DR E  M 
Sbjct: 550 AVELVGRQRFAAVLMDCRLPHLDGYEATRRIRQLPNGAGLPIIALTANALQGDR-ERCMA 608

Query: 854 MGAVGYAVKPTSREELKEVFAR 875
            G   Y  KP  R EL++V  R
Sbjct: 609 AGMDDYLSKPLRRTELQQVLQR 630



 Score = 94.0 bits (232), Expect = 3e-23
 Identities = 53/127 (41%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 1024 RDKVFEGRKVLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDV 1083
            R  V +  +VLLV+D+  N   + + L   G  V    +G EA+E L        VLMD 
Sbjct: 508  RTTVPDNDQVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVE-LVGRQRFAAVLMDC 566

Query: 1084 MMPEMDGFEATRLIRQQPRWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFS 1143
             +P +DG+EATR IRQ P    LPIIA+TA A++ D++RC+ AG +DYL+KP+    L  
Sbjct: 567  RLPHLDGYEATRRIRQLPNGAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQ 626

Query: 1144 LIRVWLP 1150
            +++ WLP
Sbjct: 627  VLQRWLP 633



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 20/88 (22%), Positives = 42/88 (47%)

Query: 887 ILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPDMLGNEL 946
           +LLVED+ + R  +  ++    + +       +A+ L+ +  +  +++D +LP + G E 
Sbjct: 517 VLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYEA 576

Query: 947 LKRMTAEDIRAFPPVIVYTGRNLTREEE 974
            +R+      A  P+I  T   L  + E
Sbjct: 577 TRRIRQLPNGAGLPIIALTANALQGDRE 604