Pairwise Alignments

Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1186 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  643 bits (1659), Expect = 0.0
 Identities = 386/1003 (38%), Positives = 578/1003 (57%), Gaps = 34/1003 (3%)

Query: 153  RITDEIRKEFDDLIITEQQLRMARNEKVSTVTVTAISAF-----VLFIVGLSALLAYLGR 207
            RIT +  +   D+ +T   L +       T+T + +        V+  +    L A++  
Sbjct: 187  RITAQRDQAVRDIALTLLALLILGTLLARTITRSIVIPLGELRDVMHRLAKGELDAHVPN 246

Query: 208  RDLLALSANYAENLQAQQRSAQRLEHQAWLRTGQTQLAQQVLGQLTLPMLGENILRFFAS 267
            +  +   +  A  ++  +++A RLE   W++    +L+  +    ++   G   L F   
Sbjct: 247  QSRVTEVSRMALAVEVFKQAALRLERDRWIKDNLARLSPALQQTDSIAEFGTTALDFLVP 306

Query: 268  YLGSVVGAVYVRDEHGRLVRVACYGLSTEEQAREQIESDH----HGLLAQAVREGRLLRL 323
              G+ V     R    R +RVA +G+    +A E +  D      G+  +A R G  + +
Sbjct: 307  LSGAGVATFNARTGGNRFMRVAGWGMP---RASETLGLDSFAPGEGVAGEAARSGSPILI 363

Query: 324  EELPEDFYRLSSGLGSGLPRSALLMPATEDGQINGVIELGFLRPLQERDEELLERVGGNL 383
            E  PE +  ++S  G+  P +  +MP    G    V+E        +  + LLE     L
Sbjct: 364  EAPPESWLHVTSATGAAAPAAIFVMPVMSRGTALAVLEFASFTAFDDSQKALLEAALPML 423

Query: 384  GMSIESARYRQRLQEVLAETQQLNEELQVQQEELKTANEELEEQSRVLKESQAHLETQQA 443
             ++IE      R  ++L E+Q   EEL+  +EEL+   E L+  +  L+ S+  L+ QQ 
Sbjct: 424  ALNIEILERNLRTLDLLEESQTQAEELKASEEELRAQGEALQVANEELRVSEEELKVQQE 483

Query: 444  ELEQTNEQLSERTEALDRKNDELSQAQLELQARADDLQRSSKYKSEFLANMSHELRTPLN 503
             L+  NE+L  ++EAL+ +   L  A+ E   RA D++++S+YKSEFLANMSHELRTPLN
Sbjct: 484  ALQTANEELRLKSEALEERGKALEDARAEADRRALDVEQASRYKSEFLANMSHELRTPLN 543

Query: 504  SSLILAKLLAENAEGNLSEEQVKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPETT 563
            S LILA+ LA+N  GN+S++QV+ A  I+ +G  LL LIND+LD++KVEAGK+ + P T 
Sbjct: 544  SVLILARDLADNDTGNMSDDQVESARVIHESGTHLLALINDVLDLSKVEAGKMTLDPVTI 603

Query: 564  QVERLVEGLRGMFQPLAGHKGLAFEVKVEPQVPVTLFTDRQRLEQILKNLLSNAIKFTER 623
             +  LV+ +RG F P+A  KGL F+V+V+P +P +L  DR ++EQI  NL+SNAIKFT  
Sbjct: 604  AIADLVQVIRGRFAPVATDKGLGFQVEVDPDLPRSLKADRGKIEQIANNLVSNAIKFTSE 663

Query: 624  GQVSMNVSFQADSGIV-FAVRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTGLGLSIS 682
            G V++ +S   D  ++  +V DTGIGIA   +Q +F AF Q D  ++R++GGTGLGL+IS
Sbjct: 664  GGVTVRLSLTGDGHVLALSVADTGIGIAPQDRQRVFAAFEQADSGTSRQFGGTGLGLTIS 723

Query: 683  RDLAHLLGGQINVDSSPGQGSVFSLILPERYAAEAEDVEPQSLRPAVDALP-PAPQAPLA 741
            R LA L+GG I +D++  +GSVF+L+LP         +   +  PA    P P P     
Sbjct: 724  RKLARLMGGDITLDANGDKGSVFTLLLP---------LAGTTQLPAPRCAPEPRP----- 769

Query: 742  AAVTRPAPAFADDRERAP-FDTRCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFE 800
             A  RP+P  A+  E  P  + + +LVIED+P F R++ D+A   G++   A     G E
Sbjct: 770  -ASARPSPPAAEAIEETPKAEGKLLLVIEDDPIFRRVVCDMAQAKGFATATAGDGKTGLE 828

Query: 801  LAAQYIPDAILLDMRLPDHSGLTVLQRLKEQASTRHIPVHIISVEDRVEAAMHMGAVGYA 860
            LA    P  ++LD+ LPD SG  V++ LK Q  TR IPVH++S  D    A  +G VG+ 
Sbjct: 829  LARLRRPSGVVLDIGLPDMSGWEVIEALKLQPETRDIPVHVMSAGDEPGRAARLGTVGHL 888

Query: 861  VKPTSREELKEVF-ARLEAKLTQKLKHILLVEDDDLQRESIARLIGDDDVEITAVAMAQD 919
             KP SRE++   F   L A+     + +LLV+ D+  R +I   +   D++IT     Q 
Sbjct: 889  TKPVSREQINGAFEVLLRARRADGRRRLLLVDGDEASRATIGETLVGLDLDITVAETGQV 948

Query: 920  ALALLRQNIYDCMIIDLKLPDMLGNELLKRMTAEDI-RAFPPVIVYTGRNLTREEEADLL 978
            AL  L    +DCM++DL L DM G E L+R  AE I    PPVIVY+ + L++++   + 
Sbjct: 949  ALEHLAAGPFDCMVLDLALSDMAGGEFLER--AERIGSGLPPVIVYSSQELSQDQTLRIR 1006

Query: 979  KYSRSIIIKGARSPERLLDEVTLFLHKVESQLSNERQRMLKTARSRDKVFEGRKVLLVDD 1038
            +++ SI+IKG+RS ERLLDEV LFLH V+++ S + +     A   D +  GR  LLVDD
Sbjct: 1007 EFTDSIVIKGSRSSERLLDEVGLFLHAVDAKKSGKAKPSPVAAEPVDAILAGRTALLVDD 1066

Query: 1039 DVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDVMMPEMDGFEATRLIR 1098
            D+RN FAL+  L  +G  V I ++G +A+ +L+   D+DLVLMD+MMP MDG++    IR
Sbjct: 1067 DMRNAFALSKVLRARGLKVLIAQDGAKALSQLQSRADVDLVLMDIMMPGMDGYQTMGEIR 1126

Query: 1099 QQPRWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRL 1141
            + PR+  LPIIA+TAKAM  D+ RCL AGA+DYL KP+D++RL
Sbjct: 1127 KDPRFAHLPIIALTAKAMAGDRDRCLAAGADDYLTKPVDVERL 1169