Pairwise Alignments

Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 887 a.a., Sensor histidine kinase RcsC from Azospirillum sp. SherDot2

 Score =  185 bits (470), Expect = 1e-50
 Identities = 114/264 (43%), Positives = 154/264 (58%), Gaps = 10/264 (3%)

Query: 472 ELQARADDLQRSSKYKSEFLANMSHELRTPLNSSLILAKLLAENAEGNLSEEQVKFAESI 531
           EL+   +  + ++K KS FLA MSHE+RTP+N  L +  LL       L + Q     ++
Sbjct: 187 ELRESREQAEEATKAKSAFLATMSHEIRTPMNGVLGMLGLLERT---ELDDHQRDTVGTM 243

Query: 532 YSAGNDLLNLINDILDIAKVEAGKLEVRPETTQVERLVEGLRGMFQPLAGHKGLAFEVKV 591
             + N LL +I+DILD +K+EAGK+++      V  LVEG+     P AG KGLA    V
Sbjct: 244 RESANALLRIIDDILDFSKIEAGKMDLERVALSVPALVEGVAETLAPAAGAKGLALLTYV 303

Query: 592 EPQVPVTLFTDRQRLEQILKNLLSNAIKFTERGQVSMNVSFQA-----DSGIVFAVRDTG 646
           +P +P  L  D  RL QIL NL  NAIKFTE G+V +    ++     ++ +  AV DTG
Sbjct: 304 DPAIPQALLGDPVRLRQILFNLAGNAIKFTEAGRVVLRAELESPPTGTETLLRIAVCDTG 363

Query: 647 IGIAADQQQAIFGAFHQVDGTSNRRYGGTGLGLSISRDLAHLLGGQINVDSSPGQGSVFS 706
           IGIA   +Q +F  F Q + ++ RR+GGTGLGLSISR LA L+GG+I V+S  G GS F 
Sbjct: 364 IGIAEATRQRLFQPFTQAESSTTRRFGGTGLGLSISRRLAALMGGEIGVESEAGLGSTFW 423

Query: 707 LILPERYAAEAEDVEPQSLRPAVD 730
           L LP   A+ A  V  +    AVD
Sbjct: 424 LRLP--LASTAAPVSAKDGPDAVD 445



 Score = 82.0 bits (201), Expect = 2e-19
 Identities = 49/127 (38%), Positives = 72/127 (56%), Gaps = 5/127 (3%)

Query: 1029 EGRKVLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQ----HDDIDLVLMDVM 1084
            +GR +L+ +D+  N   L   L+  G   E+   G EA+E L+          L+L DV 
Sbjct: 619  QGRLILVAEDNPVNRKVLLMQLQALGYAAEMAPGGAEALEALDAMRRGRRRFALLLTDVQ 678

Query: 1085 MPEMDGFEATRLIR-QQPRWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFS 1143
            MPE+DGFE TR IR  +P   +LPI+A+TA A   D +R   AG +D L+KP++L +L  
Sbjct: 679  MPEIDGFELTRRIRGDEPSADRLPIVAITANAAPADIERYRAAGMDDVLSKPLELSQLGV 738

Query: 1144 LIRVWLP 1150
             +  W+P
Sbjct: 739  TLAHWMP 745



 Score = 45.1 bits (105), Expect = 3e-08
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 722 PQSLRPAVDALPPAPQAPLAAAVTRPAPAFADDRERAPFDTRCILVIEDEPNFARILFDL 781
           P    P   ALPPA  AP A A T  AP      + A    R ILV ED P   ++L   
Sbjct: 585 PPQPHPQSSALPPALPAP-ATARTAAAPGV----DEAEAQGRLILVAEDNPVNRKVLLMQ 639

Query: 782 AHELGYSCLVAHGADEGFEL-----AAQYIPDAILLDMRLPDHSGLTVLQRLK-EQASTR 835
              LGY+  +A G  E  E        +     +L D+++P+  G  + +R++ ++ S  
Sbjct: 640 LQALGYAAEMAPGGAEALEALDAMRRGRRRFALLLTDVQMPEIDGFELTRRIRGDEPSAD 699

Query: 836 HIPVHIIS 843
            +P+  I+
Sbjct: 700 RLPIVAIT 707