Pairwise Alignments

Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 1055 a.a., Signal transduction histidine-protein kinase BarA from Alteromonas macleodii MIT1002

 Score =  214 bits (544), Expect = 4e-59
 Identities = 192/667 (28%), Positives = 307/667 (46%), Gaps = 81/667 (12%)

Query: 394  QRLQEVLAETQQLNEELQVQQEELKTANEEL-EEQSRVLKESQAHLETQQAE----LEQT 448
            ++L  +L  T      L+  +   KT  E   E+QSR+L  ++  L   + E    L + 
Sbjct: 299  EKLISLLESTNNFEAALEYSKLYTKTYEESFNEQQSRLLALNRVRLSISEKEETIKLLEK 358

Query: 449  NEQLSERTEALDRKNDELS----------------------QAQLELQARADDLQRSSKY 486
            + QL E+   + +K +                         Q +  L A   DLQ+++K 
Sbjct: 359  DNQLKEQRNLIQKKQNTFQLYFIGFVILSLGLVVGLWLRTRQQRKALDALTQDLQKATKA 418

Query: 487  KSEFLANMSHELRTPLNSSLILAKLLAENAEGNLSEEQVKFAESIYSAGNDLLNLINDIL 546
            KS+FLA MSHE+RTPLN+ + L KL    AE    ++Q    + I  A   LL++INDIL
Sbjct: 419  KSDFLARMSHEIRTPLNAIIGLTKLSQRAAEDK--DQQTNLIQ-IEGASQTLLSIINDIL 475

Query: 547  DIAKVEAGKLEVRPETTQVERLVEGLRGMFQPLAGHKGLAFEVKVEPQVPVTLFTDRQRL 606
            D +K+EAGKL++      ++ LV     +    A  K +     +   VP+ L  D  R+
Sbjct: 476  DFSKIEAGKLDIESTQFNLDALVNQTIRLHLGRAEEKHIELIQHISRDVPLNLIGDPLRI 535

Query: 607  EQILKNLLSNAIKFTERGQVSMNVSFQ---ADSGIVFAVRDTGIGIAADQQQAIFGAFHQ 663
            +QIL NL+SNA+KFTE G +S++V       D  + F V+DTGIG+ + Q+  +F  F+Q
Sbjct: 536  QQILSNLVSNALKFTEDGLISVSVRCTHNVEDIQLEFEVKDTGIGLNSTQKALLFQPFNQ 595

Query: 664  VDGTSNRRYGGTGLGLSISRDLAHLLGGQINVDSSPGQGSVFSLILPERYAAEAEDVEPQ 723
             D + +RRYGGTGLGL+I + L  L+GG+I V+S  G+G+ F   +  +  A  + V P 
Sbjct: 596  GDESISRRYGGTGLGLAICKQLVTLMGGEIWVESQLGKGASFHFTVTVKQDASQQIVSPS 655

Query: 724  SLRPAVDALPPAPQAPLAAAVTRPAPAFADDRERAPFDTRCILVIEDEPNFARILFDLAH 783
                 +  L           V+R A                   I +  + A I  D+A 
Sbjct: 656  KQLSLLKVLIADD-----IGVSRDA-------------------IIESLSVANIKADVAT 691

Query: 784  ELGYSCLVAHGADEGFELAAQYIPDAILLDMRLPDHSGLTVLQRLKEQASTRH---IPVH 840
              G   +    A  G   +A Y  D ++LD  +PD  GL V   +K++ S +    I ++
Sbjct: 692  G-GKEAVAKMRAAVG--NSAPY--DVLILDWNMPDIDGLEVAAIMKQEFSIKPPKVIMLY 746

Query: 841  IISVEDRVEAAMHMGAVGYAVKPTSREELKEVFARL-----------EAKLTQKLK--HI 887
                    E A  +G   +  KP S  EL +    L           +A     L+   I
Sbjct: 747  AFESPHMREQANQLGIRTFIKKPFSTSELVDKLQELCLNVNTRTLPADAAPVPNLRGTKI 806

Query: 888  LLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQ-NIYDCMIIDLKLPDMLGNEL 946
            L  ED+ L ++    L+ D    I  V+   +A+  LR+ N YD +++D+++P M G   
Sbjct: 807  LFAEDNTLNQKVTLGLLNDTHANIEVVSNGFEAIKALREDNSYDVVLMDIQMPVMDGLTA 866

Query: 947  LKRMTAEDIRAFPPVIVYTGRNLTREEEADLLKYSRSIIIKGARSPERLLDEVTLFLHKV 1006
             K++  ++++   P+I  T   + ++ +  L       I K    P R  D +   L+K 
Sbjct: 867  AKKI-RDELKLTLPIIAMTAHAMQQDIDKSLAAGMDGHINKPV-DPNRFFDVLVEVLNKG 924

Query: 1007 ESQLSNE 1013
            +S  + E
Sbjct: 925  KSTATTE 931



 Score =  104 bits (260), Expect = 3e-26
 Identities = 77/268 (28%), Positives = 131/268 (48%), Gaps = 16/268 (5%)

Query: 884  LKHILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNI-----YDCMIIDLKL 938
            L  +L+ +D  + R++I   +   +++       ++A+A +R  +     YD +I+D  +
Sbjct: 660  LLKVLIADDIGVSRDAIIESLSVANIKADVATGGKEAVAKMRAAVGNSAPYDVLILDWNM 719

Query: 939  PDMLGNELLKRMTAE-DIRAFPPVIVYTGRNLTREEEADLLKYSRSIIIKGARSPERLLD 997
            PD+ G E+   M  E  I+    +++Y   +    E+A+ L       IK   S   L+D
Sbjct: 720  PDIDGLEVAAIMKQEFSIKPPKVIMLYAFESPHMREQANQLGIRT--FIKKPFSTSELVD 777

Query: 998  EVTLFLHKVESQLSNERQRMLKTARSRDKVFEGRKVLLVDDDVRNIFALTSALEHKGAIV 1057
                   K++    N   R L    +      G K+L  +D+  N       L    A +
Sbjct: 778  -------KLQELCLNVNTRTLPADAAPVPNLRGTKILFAEDNTLNQKVTLGLLNDTHANI 830

Query: 1058 EIGRNGREAIERLEQHDDIDLVLMDVMMPEMDGFEATRLIRQQPRWRKLPIIAVTAKAMK 1117
            E+  NG EAI+ L + +  D+VLMD+ MP MDG  A + IR + +   LPIIA+TA AM+
Sbjct: 831  EVVSNGFEAIKALREDNSYDVVLMDIQMPVMDGLTAAKKIRDELK-LTLPIIAMTAHAMQ 889

Query: 1118 DDQQRCLQAGANDYLAKPIDLDRLFSLI 1145
             D  + L AG + ++ KP+D +R F ++
Sbjct: 890  QDIDKSLAAGMDGHINKPVDPNRFFDVL 917