Pairwise Alignments
Query, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440
Subject, 1231 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58
Score = 190 bits (482), Expect = 7e-52
Identities = 163/597 (27%), Positives = 266/597 (44%), Gaps = 102/597 (17%)
Query: 472 ELQARADDLQR-------SSKYKSEFLANMSHELRTPLNSSLILAKLLAENAEGNLSEEQ 524
E++ R ++LQR + + KSEFLANMSHE+RTP+N L +A+LLA++ L Q
Sbjct: 660 EMKVREEELQRLLSRAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAKS---KLDTRQ 716
Query: 525 VKFAESIYSAGNDLLNLINDILDIAKVEAGKLEVRPETTQVERLVEGLRGMFQPLAGHKG 584
F + I +GN LL +INDILD +K+EAG++++R VE + + A K
Sbjct: 717 KTFTDIIVKSGNALLTIINDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKD 776
Query: 585 LAFEVKVEPQVPVTLFTDRQRLEQILKNLLSNAIKFTERGQVSMNVSFQ----ADSGIVF 640
+ V+++ V + D R QI+ N++ NA+KFTE G V + +S Q ++S
Sbjct: 777 IELIVRIDASVSGKVIGDAGRFRQIVTNIVGNAVKFTETGHVLVELSAQSAEASESIFSL 836
Query: 641 AVRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTGLGLSISRDLAHLLGGQINVDSSPG 700
V D+GIGI D+ + IF F QVDG++ RR+ GTGLGL+I+ L L G+INV S G
Sbjct: 837 RVEDSGIGIPVDKLETIFDKFSQVDGSATRRHEGTGLGLAITVGLVGLFDGKINVVSEVG 896
Query: 701 QGSVFSLILPERYAAEAEDVEPQSLRPAVDALPPAPQAPLAAAVTRPAPAFADDRERAPF 760
+GS F + +P + DV S+ A+D
Sbjct: 897 RGSAFEVDIPFQVMERRRDVPLLSV--AID------------------------------ 924
Query: 761 DTRCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFELAAQ-----YIPDAILLDMR 815
D R +LVI+D RIL + G G + + + DAI+LD
Sbjct: 925 DIR-VLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVLQEAASLGFAIDAIILDYH 983
Query: 816 LPDHSGLTVLQRLKEQASTRHIPVHIISVEDRV--------------------------- 848
+P +GL V++R++ I + ++ D V
Sbjct: 984 MPVMNGLDVVERIRADKRFDDIAIVFLTSMDVVGDETLFTDLSVQAHLMKPARARLLRST 1043
Query: 849 --------------EAAMHMGAVGYAVKPTSREELKEVFARLEAKLTQK----LKHILLV 890
+ + G G +P SR K+ A A + ++ L +L+
Sbjct: 1044 LFDVVRDVRLKRIRQHPLAQGTGGEKARPESRPAEKKQRAEAPATVPERSRPCLLDVLVA 1103
Query: 891 EDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLPDMLGNELLKRM 950
ED+D+ + ++++ + V + A+ + +++D+ +P M G++ + +
Sbjct: 1104 EDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPALILMDVSMPVMNGHQATQAI 1163
Query: 951 TAEDIRA----FPPVIVYTGRNLTREEEADLLKYSRSIIIKGARSPERLLDEVTLFL 1003
A + A PVI T + E L+ + SPE L D++ +L
Sbjct: 1164 RAAEQAAGDSRHVPVIGVTAHTQEADRER-CLEAGMDDYLSKPISPESLEDKIAQWL 1219
Score = 92.8 bits (229), Expect = 2e-22
Identities = 80/301 (26%), Positives = 149/301 (49%), Gaps = 47/301 (15%)
Query: 887 ILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNI-----YDCMIIDLKLPDM 941
+L+++D+D+ R + + ++ AV +A+L++ D +I+D +P M
Sbjct: 928 VLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVLQEAASLGFAIDAIILDYHMPVM 987
Query: 942 LGNELLKRMTAEDIRAFPPVIVYTGRNLTREE--------EADLLKYSRSIIIKGARSPE 993
G ++++R+ A+ ++ T ++ +E +A L+K +R+ +++
Sbjct: 988 NGLDVVERIRADKRFDDIAIVFLTSMDVVGDETLFTDLSVQAHLMKPARARLLRST---- 1043
Query: 994 RLLDEVT-LFLHKV----------------ESQLSNERQRMLKTA----RSRDKVFEGRK 1032
L D V + L ++ ES+ + ++QR A RSR + +
Sbjct: 1044 -LFDVVRDVRLKRIRQHPLAQGTGGEKARPESRPAEKKQRAEAPATVPERSRPCLLD--- 1099
Query: 1033 VLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDVMMPEMDGFE 1092
VL+ +D+ N + L+ G I NG+ A++ E+++ L+LMDV MP M+G +
Sbjct: 1100 VLVAEDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPA-LILMDVSMPVMNGHQ 1158
Query: 1093 ATRLIRQQPRW----RKLPIIAVTAKAMKDDQQRCLQAGANDYLAKPIDLDRLFSLIRVW 1148
AT+ IR + R +P+I VTA + D++RCL+AG +DYL+KPI + L I W
Sbjct: 1159 ATQAIRAAEQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKPISPESLEDKIAQW 1218
Query: 1149 L 1149
L
Sbjct: 1219 L 1219
Score = 42.0 bits (97), Expect = 3e-07
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 1032 KVLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDD----IDLVLMDVMMPE 1087
+VL++DD+ N LT L G NG I L++ ID +++D MP
Sbjct: 927 RVLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVLQEAASLGFAIDAIILDYHMPV 986
Query: 1088 MDGFEATRLIRQQPRWRKLPIIAVTAKAMKDDQQRCLQAGANDYLAKP 1135
M+G + IR R+ + I+ +T+ + D+ +L KP
Sbjct: 987 MNGLDVVERIRADKRFDDIAIVFLTSMDVVGDETLFTDLSVQAHLMKP 1034