Pairwise Alignments

Query, 408 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 1167 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score =  130 bits (326), Expect = 3e-34
 Identities = 90/282 (31%), Positives = 145/282 (51%), Gaps = 10/282 (3%)

Query: 127 LFRQRKVLGRQLEALEQSRQEQELLLSQLQVARCELEHAVRMRDDFMSIVSHEVRTPLNG 186
           L  Q + L  Q +A+++   E      +L+    ELE + + + +F++ +SHE+RTPLN 
Sbjct: 452 LAEQTETLAEQRDAMDRKNVELNKAQLELEDRAEELERSSKYKSEFLANMSHELRTPLNS 511

Query: 187 LILETQLRKMHLARGNLDAFSVDKLQAMVERDERQINSLIRLVEDMLDVSRIRTGKLSLR 246
            ++  +L    LA    +  S ++++   E      N L+ L+ D+LD+S++  GKL + 
Sbjct: 512 SLILAKL----LAENPQENLSAEQVK-FAESIYSAGNDLLNLINDILDISKVEAGKLEVL 566

Query: 247 PKLFDLGQLVRGLVENFTAQAM--ALETHIELQRCEALKGEWDEFRIEQVVANLLSNAMR 304
           P+   + +LV GL   F   A    L   +++Q         D  R+EQ++ NLLSNA++
Sbjct: 567 PENASVARLVDGLRGMFEPLAADRKLGFQVDVQEGSPTMLFTDRQRLEQILKNLLSNAIK 626

Query: 305 YGERNPVQVRVFEQGGMAWV-QVQDHGIGISAANQQRIFQQFERV--AAQQASGGLGLGL 361
           + E+  V + V    G      V+D GIGI+   Q+ IF+ F +      +  GG GLGL
Sbjct: 627 FTEQGEVSLSVSRAPGEGIAFTVRDSGIGIAPDQQESIFEAFRQADGTTNRRYGGTGLGL 686

Query: 362 YISEQIVQAHGGRIQVESEEGKGATFTLQLPLATFKEQNDQA 403
            IS  +    GG I V SE GKG+ FTL +P    + + D A
Sbjct: 687 SISRDLATLLGGYISVSSEPGKGSVFTLVVPEQYVEREEDAA 728



 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 8    KLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHE-FALAILDVQMPGMNGF 66
            K+L+VDD   N+ AL + ++ +   V   ++   A+  L E E   L ++DV MP M+G+
Sbjct: 1044 KILLVDDDVRNIFALTSALEHKGAVVVIGRNGREAIDKLNEVEDIDLVLMDVMMPEMDGY 1103

Query: 67   ELAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPLDTLAVKSKVSVFV 125
            E   L+R   + K +PI+ V+A   + +   +   +G+ D+L KP+D   + S + V++
Sbjct: 1104 EATALIRQDPRWKKLPIIAVTAKAMKDDQE-RCLAAGSNDYLAKPIDLDRLFSLIRVWL 1161



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 25/83 (30%), Positives = 43/83 (51%)

Query: 2   LSHTTAKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMP 61
           L+    ++L+V+D      ++  LI  +D E+     A+AAL LL  H +   I+D+++P
Sbjct: 892 LTQKVKRVLLVEDDDLQRDSIARLIGDDDIEITDVGYAQAALDLLRTHIYDCMIIDLKLP 951

Query: 62  GMNGFELAELMRGTDKTKHIPIV 84
            M G EL + M   D     P++
Sbjct: 952 DMLGNELLKRMATEDICSFPPVI 974



 Score = 33.9 bits (76), Expect = 3e-05
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 6   TAKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMPGMNG 65
           T  +L+V+D P     L  L          A  A+   SL  E+     +LD+++P  +G
Sbjct: 774 TRCILVVEDEPNFARILFDLAHELGYNCLVAHGADEGYSLAEEYIPDAILLDMRLPDHSG 833

Query: 66  FELAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKP 111
             + + ++    T+HIP+  +S   R           GA+ +  KP
Sbjct: 834 LTVLQRLKEHANTRHIPVHVISVEDR----VEAAMHMGAIGYAVKP 875