Pairwise Alignments

Query, 408 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 1166 a.a., Two-component system sensor histidine kinase from Variovorax sp. SCN45

 Score =  129 bits (324), Expect = 5e-34
 Identities = 94/287 (32%), Positives = 145/287 (50%), Gaps = 13/287 (4%)

Query: 126 DLFRQRKVLGRQLEALEQSRQEQELLLSQLQVARCELEHAVRMRDDFMSIVSHEVRTPLN 185
           +L +    L  + EAL+Q       +   L+    EL+ A R + +F++ +SHE+RTPLN
Sbjct: 444 ELEQTNSQLSERTEALDQRNTALRRVQRDLEDRADELQRASRYKSEFLANMSHELRTPLN 503

Query: 186 GLILETQLRKMHLARGNLDAFSVDKLQAMVERDERQINSLIRLVEDMLDVSRIRTGKLSL 245
             ++  +L   +  +GNL    V   +++        N L+ L+ D+LD+S++  GKL +
Sbjct: 504 SALILAKLLGDN-PQGNLSPEQVKFAESIYSSG----NDLLVLINDILDISKVEAGKLEV 558

Query: 246 RPKLFDLGQLVRGLVENFTAQAMALETHIELQRCEALKGEW--DEFRIEQVVANLLSNAM 303
            P+   L +L   L   F   AM       L       G    D  R+EQ++ NLLSNA+
Sbjct: 559 VPEDVPLRRLAESLETTFRPLAMQKNLSFRLDIRPDAPGSLVTDSQRVEQILKNLLSNAL 618

Query: 304 RYGERNPVQVRVF--EQGGMAWVQVQDHGIGISAANQQRIFQQFERV--AAQQASGGLGL 359
           ++ +R  V + V     GG A+  V D GIGI     + IF+ F +      +  GG GL
Sbjct: 619 KFTDRGEVALVVSGTADGGAAFA-VSDSGIGIDPQQHELIFEAFRQADGTTSRRYGGTGL 677

Query: 360 GLYISEQIVQAHGGRIQVESEEGKGATFTLQLPLATFKEQNDQARAT 406
           GL IS  + Q  GG + V+S+ G+G+TF LQLP A   + +  A AT
Sbjct: 678 GLSISRDLTQLLGGTLAVQSQPGQGSTFVLQLP-AKAPQASGNASAT 723



 Score = 50.8 bits (120), Expect = 2e-10
 Identities = 33/118 (27%), Positives = 62/118 (52%), Gaps = 2/118 (1%)

Query: 9    LLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLE-HEFALAILDVQMPGMNGFE 67
            +L+VDD   N+ AL + ++     V   ++   AL  L +  E  L ++DV MP M+G E
Sbjct: 1044 ILLVDDDVRNIFALTSALEQRGAAVEIGRNGREALEKLDQVREIDLVLMDVMMPEMDGLE 1103

Query: 68   LAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPLDTLAVKSKVSVFV 125
                MR   + + +P++ ++A   + +   +   +GA D+L KP+D   + S + V++
Sbjct: 1104 ATRRMRADPRFEKMPVIAITAKAMKDDRE-QCLAAGANDYLAKPVDLERLFSLLRVWM 1160



 Score = 39.7 bits (91), Expect = 5e-07
 Identities = 42/172 (24%), Positives = 71/172 (41%), Gaps = 22/172 (12%)

Query: 8   KLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMPGMNGFE 67
           ++L+++D P+    L  L          A  A     L  +      +LD+++P   G +
Sbjct: 774 RVLVIEDEPQFAHILYDLAHELGYRCLVAHGAADGFELATQFVPDAILLDMRLPDSTGLD 833

Query: 68  LAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPL-------------DT 114
           + + ++ +  T+HIPI  VSAA      A    + GA+ +  KP              D 
Sbjct: 834 VLQRLKDSPHTRHIPIHVVSAADNAQGAAL---QMGAIGYALKPTTRDELMRVFARLEDK 890

Query: 115 LAVKSKVSVFV---DLFRQ---RKVLGRQLEALEQSRQEQELLLSQLQVARC 160
           L  K KV + V   DL R+   R +    +E +     E+ L L + +V  C
Sbjct: 891 LTQKVKVVLLVEDDDLQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDC 942



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 23/83 (27%), Positives = 40/83 (48%)

Query: 2   LSHTTAKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMP 61
           L+     +L+V+D      ++  LI+ +D E+    S E AL LL    F   I D+++P
Sbjct: 891 LTQKVKVVLLVEDDDLQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDCMITDLRLP 950

Query: 62  GMNGFELAELMRGTDKTKHIPIV 84
            M G +L + M   +     P++
Sbjct: 951 DMQGSDLLKAMAAEEIVSFPPVI 973



 Score = 25.8 bits (55), Expect = 0.007
 Identities = 32/145 (22%), Positives = 67/145 (46%), Gaps = 11/145 (7%)

Query: 210  KLQAMVERDERQINSLIRLVE-DMLDVSRIRTGKLS---LRPKLFD---LGQLVRGLVEN 262
            K+  +VE D+ Q  S++RL+E D +++  + +G+ +   LR ++FD       +  +  +
Sbjct: 896  KVVLLVEDDDLQRESVMRLIEDDDIEIVAVGSGEEALELLRTRVFDCMITDLRLPDMQGS 955

Query: 263  FTAQAMALETHIELQRCEALKG----EWDEFRIEQVVANLLSNAMRYGERNPVQVRVFEQ 318
               +AMA E  +         G      +E  +++   +++    R  ER   +V +F  
Sbjct: 956  DLLKAMAAEEIVSFPPVIVYTGRNLTRDEETELQRYSRSIIIKGARSPERLLDEVTLFLH 1015

Query: 319  GGMAWVQVQDHGIGISAANQQRIFQ 343
               A +  +  G+  +A  + RIF+
Sbjct: 1016 KVEAELSSERQGMLKTARGRDRIFE 1040