Pairwise Alignments

Query, 408 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 1155 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  138 bits (347), Expect = 1e-36
 Identities = 96/283 (33%), Positives = 151/283 (53%), Gaps = 14/283 (4%)

Query: 126 DLFRQRKVLGRQLEALEQSRQEQELLLSQLQVARCELEHAVRMRDDFMSIVSHEVRTPLN 185
           +L +  + L  + EAL++   E      +LQ    +L+ + + + +F++ +SHE+RTPLN
Sbjct: 444 ELEQTNEQLSERTEALDRKNDELSQAQLELQARADDLQRSSKYKSEFLANMSHELRTPLN 503

Query: 186 GLILETQLRKMHLARGNLDAFSVDKLQAMVERDERQINSLIRLVEDMLDVSRIRTGKLSL 245
             ++  +L   + A GNL    V   +++        N L+ L+ D+LD++++  GKL +
Sbjct: 504 SSLILAKLLAEN-AEGNLSEEQVKFAESIYSAG----NDLLNLINDILDIAKVEAGKLEV 558

Query: 246 RPKLFDLGQLVRGLVENFTAQA----MALETHIELQRCEALKGEWDEFRIEQVVANLLSN 301
           RP+   + +LV GL   F   A    +A E  +E Q    L    D  R+EQ++ NLLSN
Sbjct: 559 RPETTQVERLVEGLRGMFQPLAGHKGLAFEVKVEPQVPVTLFT--DRQRLEQILKNLLSN 616

Query: 302 AMRYGERNPVQVRVFEQGGMAWV-QVQDHGIGISAANQQRIFQQFERV--AAQQASGGLG 358
           A+++ ER  V + V  Q     V  V+D GIGI+A  QQ IF  F +V   + +  GG G
Sbjct: 617 AIKFTERGQVSMNVSFQADSGIVFAVRDTGIGIAADQQQAIFGAFHQVDGTSNRRYGGTG 676

Query: 359 LGLYISEQIVQAHGGRIQVESEEGKGATFTLQLPLATFKEQND 401
           LGL IS  +    GG+I V+S  G+G+ F+L LP     E  D
Sbjct: 677 LGLSISRDLAHLLGGQINVDSSPGQGSVFSLILPERYAAEAED 719



 Score = 60.1 bits (144), Expect = 3e-13
 Identities = 36/119 (30%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 8    KLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHE-FALAILDVQMPGMNGF 66
            K+L+VDD   N+ AL + ++ +   V   ++   A+  L +H+   L ++DV MP M+GF
Sbjct: 1032 KVLLVDDDVRNIFALTSALEHKGAIVEIGRNGREAIERLEQHDDIDLVLMDVMMPEMDGF 1091

Query: 67   ELAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPLDTLAVKSKVSVFV 125
            E   L+R   + + +PI+ V+A   + +   +  ++GA D+L KP+D   + S + V++
Sbjct: 1092 EATRLIRQQPRWRKLPIIAVTAKAMKDDQQ-RCLQAGANDYLAKPIDLDRLFSLIRVWL 1149



 Score = 37.7 bits (86), Expect = 2e-06
 Identities = 23/83 (27%), Positives = 43/83 (51%)

Query: 2   LSHTTAKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMP 61
           L+     +L+V+D      ++  LI  +D E+     A+ AL+LL ++ +   I+D+++P
Sbjct: 880 LTQKLKHILLVEDDDLQRESIARLIGDDDVEITAVAMAQDALALLRQNIYDCMIIDLKLP 939

Query: 62  GMNGFELAELMRGTDKTKHIPIV 84
            M G EL + M   D     P++
Sbjct: 940 DMLGNELLKRMTAEDIRAFPPVI 962



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 24/106 (22%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 6   TAKLLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMPGMNG 65
           T  +L+++D P     L  L          A  A+    L  ++     +LD+++P  +G
Sbjct: 762 TRCILVIEDEPNFARILFDLAHELGYSCLVAHGADEGFELAAQYIPDAILLDMRLPDHSG 821

Query: 66  FELAELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKP 111
             + + ++    T+HIP+  +S   R           GAV +  KP
Sbjct: 822 LTVLQRLKEQASTRHIPVHIISVEDR----VEAAMHMGAVGYAVKP 863