Pairwise Alignments

Query, 408 a.a., Response regulator/sensor histidine kinase from Pseudomonas putida KT2440

Subject, 1186 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  121 bits (303), Expect = 1e-31
 Identities = 87/265 (32%), Positives = 142/265 (53%), Gaps = 17/265 (6%)

Query: 139 EALEQSRQEQELLLSQLQVARCELEHAVRMRDDFMSIVSHEVRTPLNG-LILETQLRKMH 197
           EALE+  +  E   ++      ++E A R + +F++ +SHE+RTPLN  LIL   L    
Sbjct: 497 EALEERGKALEDARAEADRRALDVEQASRYKSEFLANMSHELRTPLNSVLILARDLADND 556

Query: 198 LARGNLDAFSVDKLQAMVERDERQINSLIRLVEDMLDVSRIRTGKLSLRP---KLFDLGQ 254
              GN+    V+  + + E        L+ L+ D+LD+S++  GK++L P    + DL Q
Sbjct: 557 T--GNMSDDQVESARVIHESGTH----LLALINDVLDLSKVEAGKMTLDPVTIAIADLVQ 610

Query: 255 LVRG-LVENFTAQAMALETHIELQRCEALKGEWDEFRIEQVVANLLSNAMRYGERNPVQV 313
           ++RG      T + +  +  ++     +LK   D  +IEQ+  NL+SNA+++     V V
Sbjct: 611 VIRGRFAPVATDKGLGFQVEVDPDLPRSLKA--DRGKIEQIANNLVSNAIKFTSEGGVTV 668

Query: 314 RVF--EQGGMAWVQVQDHGIGISAANQQRIFQQFERV--AAQQASGGLGLGLYISEQIVQ 369
           R+     G +  + V D GIGI+  ++QR+F  FE+      +  GG GLGL IS ++ +
Sbjct: 669 RLSLTGDGHVLALSVADTGIGIAPQDRQRVFAAFEQADSGTSRQFGGTGLGLTISRKLAR 728

Query: 370 AHGGRIQVESEEGKGATFTLQLPLA 394
             GG I +++   KG+ FTL LPLA
Sbjct: 729 LMGGDITLDANGDKGSVFTLLLPLA 753



 Score = 52.8 bits (125), Expect = 6e-11
 Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 2/117 (1%)

Query: 10   LIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEH-EFALAILDVQMPGMNGFEL 68
            L+VDD   N  AL  +++    +V  AQ    ALS L    +  L ++D+ MPGM+G++ 
Sbjct: 1062 LLVDDDMRNAFALSKVLRARGLKVLIAQDGAKALSQLQSRADVDLVLMDIMMPGMDGYQT 1121

Query: 69   AELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPLDTLAVKSKVSVFV 125
               +R   +  H+PI+ ++A     +   +   +GA D+L KP+D   ++  +++ +
Sbjct: 1122 MGEIRKDPRFAHLPIIALTAKAMAGD-RDRCLAAGADDYLTKPVDVERLRQVMALLI 1177



 Score = 42.4 bits (98), Expect = 8e-08
 Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 10/188 (5%)

Query: 9   LLIVDDLPENLLALDALIQGEDREVHQAQSAEAALSLLLEHEFALAILDVQMPGMNGFEL 68
           LL+++D P     +  + Q +      A   +  L L      +  +LD+ +P M+G+E+
Sbjct: 793 LLVIEDDPIFRRVVCDMAQAKGFATATAGDGKTGLELARLRRPSGVVLDIGLPDMSGWEV 852

Query: 69  AELMRGTDKTKHIPIVFVSAAGREMNYAFKGYESGAVDFLHKPLDTLAVKSKVSVFVDLF 128
            E ++   +T+ IP V V +AG E   A +    G V  L KP+    +     V   L 
Sbjct: 853 IEALKLQPETRDIP-VHVMSAGDEPGRAAR---LGTVGHLTKPVSREQINGAFEV---LL 905

Query: 129 RQRKVLGRQLEALEQSRQEQELLLSQLQVARCELEHAVRMRDDFMSIVSHEVRTPLNGLI 188
           R R+  GR+   L    +     + +  V    L+  + + +     + H    P + ++
Sbjct: 906 RARRADGRRRLLLVDGDEASRATIGETLVG---LDLDITVAETGQVALEHLAAGPFDCMV 962

Query: 189 LETQLRKM 196
           L+  L  M
Sbjct: 963 LDLALSDM 970