Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 78/333 (23%), Positives = 138/333 (41%), Gaps = 15/333 (4%)

Query: 7   VAVYFLNAMLHALRDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALIQRLDDE 66
           ++V F++A+  A+     +    LL  G+ P  L +  AR+    + +L  A IQ   D 
Sbjct: 9   LSVGFVHALADAIHSHGLDPQPLLLQYGLDPARLAEAGARLSIPRYMRLGHAAIQLTGDP 68

Query: 67  FFGLDSHGMPLGSFALICRGLIL------EPNLEKALRQCMGGFGLFLRDLRG--SLTVR 118
             GL      +G  + + +G +        PN+ +A R       L+  + RG  S    
Sbjct: 69  GLGLR-----MGQLSRLSQGGLAGVTAAQAPNVREAARALTRFEALYGSNYRGQSSFVED 123

Query: 119 GGRAVISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDLL 178
              A +   S         +  ++ +   +  L  LA + +   R ++    P   D   
Sbjct: 124 AEGAWLRFYSISPYNAYNRFVVDSIIAGWLQQLSSLAQQPVQAQRIDIEFEAPEYSDQYS 183

Query: 179 LWGPDLRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEVYR 238
           + G D+  G+   ++  +   L L   Q   +    L    +  +++      L   + R
Sbjct: 184 VLG-DVHFGAEANQLRLNQQTLALRNPQHCPSTWNLLLQLCERELVQLTRTRSLRERITR 242

Query: 239 HLRA-LRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGAL 297
            L   L  G+ P L  +A +  +   T RR+L  EG  ++ I ++ RR +A   +R+  L
Sbjct: 243 LLGPMLNGGREPDLEEVAARLKLPTWTLRRKLADEGTQFRAILNDTRRDLAMTYIRDTEL 302

Query: 298 SIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYR 330
           +  EIA   GF    AF RAF++W  Q+PG +R
Sbjct: 303 AFGEIAYLLGFASAQAFQRAFRRWNNQTPGEFR 335