Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 338 a.a., AraC-type DNA-binding domain-containing proteins from Variovorax sp. SCN45

 Score =  138 bits (348), Expect = 2e-37
 Identities = 104/336 (30%), Positives = 156/336 (46%), Gaps = 6/336 (1%)

Query: 1   MRESDSVAVYFLNAMLHALRDTPAERDAQLLAV--GIAPQLLDQPLARVPAKAFAQLWLA 58
           M+E  +V V FL  ML   R     +D   +A   GI+P LL Q  ARV  + F +++  
Sbjct: 1   MQERATVPVSFLRDMLTGARRQLRAQDIDAIATQAGISPLLLRQGAARVTREQFVRMYEG 60

Query: 59  LIQRLDDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVR 118
           +   + DE  GL S  +  G+   +   L+  P+L  A+ +    + L L D R  +   
Sbjct: 61  VALFMGDEMLGLWSRPIRAGALKYLGLSLLDAPSLMVAMYRFTRFWNLLLDDYRLRMARA 120

Query: 119 GGRAVISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDL- 177
            G A +++   +       +  E  + L+ G+  WL GR++ +     A  RPA+ D+  
Sbjct: 121 NGVATVTIAPRLDGTTPTPFGHELMVKLIHGVASWLVGRQLPVLEVGFAFRRPARFDEYA 180

Query: 178 -LLWGPDLRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEV 236
            L  GP +R G   + V F  A LR    + R  L  F+R AP   +    + +   + V
Sbjct: 181 NLFPGP-VRFGQAASSVSFSEAVLRQTFRRTRGELLDFVRRAPDDWIFVTFDHDTTRSSV 239

Query: 237 YRHLRALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGA 296
            R   A R     TL   A    +S     R+L  EG S++ +K+EVRR +A +RL +  
Sbjct: 240 -RDFVAARLATGVTLGDAATSLHMSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTR 298

Query: 297 LSIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYRAR 332
             I  IA   GF    AFHRAF+ WTG +P  YR R
Sbjct: 299 EPIDLIAASVGFDNTPAFHRAFRTWTGSTPRGYRLR 334