Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 1e-38
 Identities = 99/301 (32%), Positives = 145/301 (48%), Gaps = 3/301 (0%)

Query: 34  GIAPQLLDQPLARVPAKAFAQLWLALIQRLDDEFFG-LDSHGMPLGSFALICRGLILEPN 92
           GI+  LL+   +RV  + F  L++A+   L+DE  G L    M  GSFAL+ R      +
Sbjct: 39  GISESLLELKDSRVTVEQFNALFIAVKDSLNDECLGYLHERPMRPGSFALMVRSAFTAHS 98

Query: 93  LEKALRQCMGGFGLFLRDLRGSLTVRGGRAVISVQSNIADPLTRVYAEETYLVLMIGMLC 152
           L  ALR+    F L   D+       G     +++          +     L +   +L 
Sbjct: 99  LSCALRRLSESFALLQDDVTLVPVTEGALGGFALEMRGGPGAHAEFLHAHLLRVFWRLLL 158

Query: 153 WLAGRRIAIDRTELAVSRPAQEDDL-LLWGPDLRLGSGRTEVEFDSAYLRLPVVQDRAAL 211
           WL G R+   R +   + P        ++   L  G  RT   FD+   + PV +DR AL
Sbjct: 159 WLHGGRLVPQRFDFNFALPLHAMSYGRIFSGTLCFGQPRTAAWFDADAFKQPVRRDRDAL 218

Query: 212 KTFLRSAPQGLVIRFRNQNGLVAEVYRHLRALRYGQWPTLAALAQQQGISASTFRRQLER 271
           ++FLR+ P  +V  + N+    A V   L+     +WP L   AQ+  +S S  +R L  
Sbjct: 219 QSFLRATPGNVVGPYLNERSASARVRMVLQRAS-PEWPDLVVTAQRLHLSVSALQRHLAS 277

Query: 272 EGRSYQQIKDEVRRAMAFERLREGALSIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYRA 331
           EG S+Q +KD++RR MA  RL     S+  IA   GF + +AF RAFK WTG +PG+YRA
Sbjct: 278 EGTSFQALKDQLRRDMAIVRLTSSEASLVAIAADLGFTDSTAFQRAFKVWTGSAPGAYRA 337

Query: 332 R 332
           R
Sbjct: 338 R 338