Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 342 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  156 bits (395), Expect = 7e-43
 Identities = 102/322 (31%), Positives = 156/322 (48%), Gaps = 3/322 (0%)

Query: 11  FLNAMLHALRDTPAERDAQLLAVGIAPQLLDQPLARVPAKAFAQLWLALIQRLDDEFFGL 70
           F+ A++        +    L A  I P+ L +P ARV A  F  L    +Q LDDE  G 
Sbjct: 18  FVRAIVQGYERYGVDPAEALKAAQITPRELARPGARVTAAQFEALSEHAMQELDDEALGW 77

Query: 71  DSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVRGGRAVISVQSNI 130
            S  +P GS+ ++CR  +  P+L  A+++      L   D+  +L V GG A + +  N 
Sbjct: 78  FSRRLPWGSYGMLCRASLTSPDLGVAIKRWCRHHRLLTDDIGLALEVAGGVATLRITENR 137

Query: 131 A-DPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDLL-LWGPDLRLGS 188
             D   R +   T L  M G +CW    RI++       + P   D    ++ P++R  +
Sbjct: 138 PLDDAFREFCLVTSLRFMHGYMCWAIDSRISLRSASFPFAAPPHSDAYAPMFTPEVRFDA 197

Query: 189 GRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEVYRHLRALRYGQW 248
            +  + FD  YL LP+ +D  AL+T L+ A    ++++R    L+ +  R L   R  + 
Sbjct: 198 PQAGISFDERYLALPLQRDERALRTMLKRALPLTILQYRRDR-LLGQRVRELLRSRASEA 256

Query: 249 PTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGALSIAEIAEQAGF 308
            T  ALA    +S  T  RQL  EG S Q +K+EVR  +A E LR     I ++A   GF
Sbjct: 257 TTAEALAGLLNVSGRTLHRQLHEEGTSLQTLKNEVRHELAVELLRRTTRPIKQVALAVGF 316

Query: 309 QEPSAFHRAFKKWTGQSPGSYR 330
           +   +F RAF +WTG +P  +R
Sbjct: 317 RNEKSFSRAFLQWTGHAPRDFR 338