Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 326 a.a., putative transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 80/307 (26%), Positives = 139/307 (45%), Gaps = 11/307 (3%)

Query: 33  VGIAPQLLDQPLARVPAKAFAQLWLALIQRLDDEFFGLD-SHGMPLGSFALICRGLILEP 91
           +G+    LD P AR P  +  +LW   ++   +E  GL+ +  +   SF ++   L+   
Sbjct: 5   LGLDFAALDDPDARFPQDSMTRLWQLAVELSGNEAIGLNMARVVRPASFHVVGYALMSSR 64

Query: 92  NLEKALRQCMGGFGLFLR--DLRGSLTVRGGRAVISVQSNIADPLTRVYAEETYLVLMIG 149
            L +   + +    +     DL   L   G   +++V  +   P TR ++ E  L   + 
Sbjct: 65  TLAEGFERLVRYQRIIAESSDLSFVLGPEGYSLILTVHGDHLPP-TR-HSAEASLACALA 122

Query: 150 MLCWLAGRRIAIDRTELAVSRPAQ-EDDLLLWGPDLRLGSGRTEVEFDSAYLRLPVVQDR 208
           +  WL+GR +   R  +   +P   E   + +   L  G+    + F+ A +  P+    
Sbjct: 123 LCKWLSGRPVQPRRVLVQGPQPKNVEPYKVAFHSPLVFGAPHDALVFERADMEAPLPTAN 182

Query: 209 AALKTFLRSAPQGLVIRFRNQNGLVAEVYRHL--RALRYGQWPTLAALAQQQGISASTFR 266
            A+           + RF      V+   R +  R L  G+ P    LAQ   +S  T +
Sbjct: 183 EAMAVLHDRFAGEYLARFSESR--VSHRVRQVLCRILPQGE-PKRETLAQALHLSQRTLQ 239

Query: 267 RQLEREGRSYQQIKDEVRRAMAFERLREGALSIAEIAEQAGFQEPSAFHRAFKKWTGQSP 326
           R+L+ EG S+Q + D+ RR +A + L +  +++ E A   GF +PS F+RAF++W   +P
Sbjct: 240 RRLQEEGTSFQTLLDDTRRELAEQYLAQPGMTLLETAYLLGFADPSNFYRAFRRWFDATP 299

Query: 327 GSYRARL 333
             YRARL
Sbjct: 300 SEYRARL 306