Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 341 a.a., transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  201 bits (512), Expect = 2e-56
 Identities = 111/304 (36%), Positives = 172/304 (56%), Gaps = 3/304 (0%)

Query: 35  IAPQLLDQPLARVPAKAFAQLWLALIQRLDDEFFGLDSHGMPLGSFALICRGLILEPNLE 94
           I P+LLDQ  ARVPA  F++LW+AL   LDDEFF  DSH +  GSF L+ +  +    + 
Sbjct: 38  IDPRLLDQRYARVPAGTFSRLWIALADLLDDEFFAADSHPLRRGSFKLMAQLALGCDTIG 97

Query: 95  KALRQCMGGFGLFLRDLRGSLTVRGGRAVISVQSNIADPLTRVYAEETYLVLMIGMLCWL 154
           +AL++ +      L D+ GS+   G  A I +  +    L RV+    +LVL+ G+LCWL
Sbjct: 98  QALKRILAFLRTALDDIYGSVECEGEHAAIIIHDH--GELRRVFCYGAWLVLVHGLLCWL 155

Query: 155 AGRRIAIDRTELAVSRPAQEDDLLL-WGPDLRLGSGRTEVEFDSAYLRLPVVQDRAALKT 213
             RRI I +  +   +P  + D  + +  ++   + RT   F+ ++L   V Q   +L  
Sbjct: 156 CDRRIPIVKLSMRPPQPVDDSDYRMRFCEEIEWRADRTSAVFEKSFLAYKVCQTPVSLPA 215

Query: 214 FLRSAPQGLVIRFRNQNGLVAEVYRHLRALRYGQWPTLAALAQQQGISASTFRRQLEREG 273
           FL+  P   ++++RN +     + R L+ L    WP L  LA+   +S+ST +R+L  EG
Sbjct: 216 FLKGTPSNFLVKYRNDDSTSIMIRRRLKLLSPHTWPELDELARDLSMSSSTLQRRLYAEG 275

Query: 274 RSYQQIKDEVRRAMAFERLREGALSIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYRARL 333
            +YQ++KD +RR ++   L    +++  +A + GF E SAFHRAFKKWTG +PG+YR  L
Sbjct: 276 FTYQRLKDNLRRDISISLLCRAGMTVDGVASEVGFIETSAFHRAFKKWTGITPGAYRRSL 335

Query: 334 VGLR 337
           +  R
Sbjct: 336 LSPR 339