Pairwise Alignments

Query, 362 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 340 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  200 bits (509), Expect = 4e-56
 Identities = 121/334 (36%), Positives = 191/334 (57%), Gaps = 6/334 (1%)

Query: 1   MRESDSVAVYFLNAMLHALRDTPA-ERDAQLLA-VGIAPQLLDQPLARVPAKAFAQLWLA 58
           M + D++++  +   L  L+  PA E D+ LLA  GIA + L  P ARV A+++A+LW  
Sbjct: 1   MSDKDTISMQLVREAL--LQTCPAGEPDSGLLARAGIAVEQLHLPEARVSAESYARLWRL 58

Query: 59  LIQRLDDEFFGLDSHGMPLGSFALICRGLILEPNLEKALRQCMGGFGLFLRDLRGSLTVR 118
           L +R +DEFF +D+ G+  GS A +CR  + +P L   L   +    L L+D++ SL  +
Sbjct: 59  LARRCNDEFFAMDTRGLCSGSLAFMCRASMGQPTLGAGLETSLAFLSLMLQDMQPSLVRQ 118

Query: 119 GGRAVISVQSNIADPLTRVYAEETYLVLMIGMLCWLAGRRIAIDRTELAVSRPAQEDDL- 177
            G A I +     +P  R +   T+ +++ G+ CWLAGRRI I   +L  + P   DD  
Sbjct: 119 QGLAEIVINEPRDEP-RRAFTYFTFWMIVHGVTCWLAGRRIPILSIDLRCAEPPFCDDYR 177

Query: 178 LLWGPDLRLGSGRTEVEFDSAYLRLPVVQDRAALKTFLRSAPQGLVIRFRNQNGLVAEVY 237
           +++  +L     RT +   S YL LP+ +    L+ FL  AP  +++++R+   L   + 
Sbjct: 178 VMFSENLHFERPRTRMIIASQYLDLPLRRSEEELQRFLAEAPGNILVKYRDPASLGRRIR 237

Query: 238 RHLRALRYGQWPTLAALAQQQGISASTFRRQLEREGRSYQQIKDEVRRAMAFERLREGAL 297
             L  L   QWP    LA+Q  +S ST RR+L  EG++YQ +KD VRR +A   L +  +
Sbjct: 238 TDLLRLAPEQWPDADRLARQLCLSPSTLRRRLAEEGQNYQGLKDSVRRELAIAWLSQEDV 297

Query: 298 SIAEIAEQAGFQEPSAFHRAFKKWTGQSPGSYRA 331
           ++ E+AE+ GF + S+F++AF+KW G +PG YRA
Sbjct: 298 AMGELAERLGFADSSSFYKAFRKWFGCNPGHYRA 331