Pairwise Alignments

Query, 477 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 512 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  268 bits (684), Expect = 4e-76
 Identities = 191/499 (38%), Positives = 256/499 (51%), Gaps = 39/499 (7%)

Query: 5   IRLEGRKGLADQLYQQLRDGIDSGHLAAGSQLPPTRLLAEQLGVSRKTVAEAYSRLTYDN 64
           I L+ R+GL  QLY  LR  +  G L +G++LP TR LA  L +SR +V  AY +L  + 
Sbjct: 15  IELDRRQGLTRQLYDALRQRVLDGRLVSGTRLPATRDLAAALSISRNSVVRAYDQLYAEG 74

Query: 65  LLSGVVGRGTFVTP------------------------RHPLRSNESATLPLAGAASLER 100
                VG GT+V                           +P ++ ++A + +  +A+L R
Sbjct: 75  FTESRVGDGTYVAKLPTAKKLSTNLSTGLSTGLSPGLSTNPSQNPQAAPVKVIHSAALGR 134

Query: 101 WQQRATVLSQRQLQAPSRYDFVGGASSKAQFPFDQWRSCLNYALRRSQRHPERQF--PAQ 158
            +     L       P R  F  G  +   FPFD W   LN A  R     +  +  PA 
Sbjct: 135 LENNHLPLPPT---GPPRA-FRVGVPAFDLFPFDVWAK-LNAAFWRKPDLEQLCYGNPA- 188

Query: 159 GLPELREAIAHHIAYSRGVHCSAADLLVCNGAQQALDLIARVLVEPGCQVAMEDPGYPPA 218
           G P LR  IA ++  SRG+ CSA  +++ +GAQQA+ L A++LV PG  VA+E+PGY  A
Sbjct: 189 GDPRLRGLIAAYLRSSRGMQCSAEQIVITSGAQQAISLCAQLLVAPGDGVAIENPGYRAA 248

Query: 219 RQLFLALGARLQSVPVDDEGL-C-VEQIADGTRLIYVTPSHQFPLGMPMSEPRRHALLAR 276
              F   GA+L+ V VD EG+ C V       RL YVTPSHQ+PLG+ MS  RR  LLA 
Sbjct: 249 GHAFALAGAQLRGVAVDAEGIDCNVLNTLSDCRLAYVTPSHQYPLGVVMSLARRLELLAW 308

Query: 277 AAELGALIIEDDYDCEFRYHGPASDALQRLDRHGLVAYVGTFSKTLLPELRLGYAVLPPA 336
           A   G  IIEDDYD E+RY G     L  LDR G V YVGTF K   P LRLGY VLPP 
Sbjct: 309 AERSGGWIIEDDYDGEYRYSGAPLAPLAALDRSGRVLYVGTFGKVAFPALRLGYLVLPPT 368

Query: 337 VLQAACVAKHLSDWHSPTLLQWALARFLGEGHLNKHIRRCHEVYSARRERILARLGGDLA 396
           +++A    + +   HS    Q  +A F+  GH  +HIRR      +RR  +L    G+LA
Sbjct: 369 LVEAFAQRRAVDVRHSEVSTQAVMAEFMATGHFQRHIRRMRRAALSRRNALLNAWSGELA 428

Query: 397 PWFSAIPASAGFHLSALATPGVDVELLANLARKVEVGLYSLAPFF---SEAP--VRPGLL 451
              S   A+AG HL+         + L   AR VEV + +L+ ++   S  P   R GL+
Sbjct: 429 GVGSPPNAAAGLHLTVRVDSLAREQQLLAQARSVEVEISALSNYWLPDSSTPPDQRAGLV 488

Query: 452 MGFGAIELLDIDPALDRVR 470
           +GF A+    I  AL R+R
Sbjct: 489 LGFAAVPEAAIRQALGRLR 507