Pairwise Alignments

Query, 477 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 388 a.a., GntR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  146 bits (368), Expect = 1e-39
 Identities = 112/366 (30%), Positives = 168/366 (45%), Gaps = 23/366 (6%)

Query: 114 QAPSRYDFVGGASSKAQFPFDQWRSC-LNYALRRSQRHPERQFPAQGLPELREAIAHHIA 172
           Q P    F GG  ++A  P   W    LN           +   ++G P+LRE +A   A
Sbjct: 23  QRPQVMSFAGGLPAEAMLPALDWDDMPLNIG---------QYGMSEGEPQLRELLAAE-A 72

Query: 173 YSRGVHCSAADLLVCNGAQQALDLIARVLVEPGCQVAMEDPGYPPARQLFLALGARLQSV 232
            + GV C A+ +LV +G+QQALDL A++ ++ G QV +E P Y  A Q+F   GA   +V
Sbjct: 73  RALGVPCQASQVLVVSGSQQALDLAAKLYIDKGTQVLLEGPTYLAALQIFQLFGADCLTV 132

Query: 233 PVDDEGLCVEQIADGTR-----LIYVTPSHQFPLGMPMSEPRRHALLARAAELGALIIED 287
            ++ +G  +  +           IY+ P+ Q P  +  SE +R A+ A   E G  +IED
Sbjct: 133 HLEADGPNLSALRASLERHRPAFIYLIPTFQNPSAVRYSEAKREAVAALLDEFGVTLIED 192

Query: 288 DYDCEFRYHGPASDALQRLDRHGLVAYVGTFSKTLLPELRLGYAVLPPAVLQAACVAKHL 347
           +   E  + G ++  +    +     Y GT SKTLLP LR+GY +  P +       K  
Sbjct: 193 EPYRELTFDGGSAKPIVGRLKKASWIYTGTVSKTLLPGLRVGYLIASPDLFAHLLKLKQS 252

Query: 348 SDWHSPTLLQWALARFLGEGHLNKHIRRCHEVYSARRERILARLG---GDLAPWFSAIPA 404
           +D H+  + QW   +++G     +H+      Y  RR+   A L     DLA W   +P 
Sbjct: 253 ADLHTNRVGQWQAMQWIGSEKYQQHLVELRSFYRERRDAFQAALQRHFADLADW--QVPQ 310

Query: 405 SAGFHLSALATPGVDVELLANLARKVEVGLYSLAPFFSEAPVRPG-LLMGFGAIELLDID 463
              F    L  P +D   L   A + +V      PFFSE    PG L + F  I+   +D
Sbjct: 311 GGLFFWLTLKQP-LDTRTLLAPALEQDVAFMPGEPFFSEPDQHPGSLRLNFSHIDPARLD 369

Query: 464 PALDRV 469
             L R+
Sbjct: 370 EGLKRL 375