Pairwise Alignments

Query, 411 a.a., glycolate oxidase, iron-sulfur subunit from Pseudomonas putida KT2440

Subject, 936 a.a., 4Fe-4S ferredoxin from Pseudomonas simiae WCS417

 Score = 61.6 bits (148), Expect = 1e-13
 Identities = 89/375 (23%), Positives = 135/375 (36%), Gaps = 60/375 (16%)

Query: 18  AERILRTCVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQMLEGEPVTAST--------Q 69
           A+ ++  C+ CGFC   CP+  L       PR RI + + +   +     T         
Sbjct: 533 ADELVDKCIECGFCEPVCPSKGL----TLSPRQRIVIWRDIQAKKRAGVDTTDLEAAYHY 588

Query: 70  LHLDRCLTCRNCETTCPSGVKYHDLL------DIGRAVVEQQVPRPLGQRL--------L 115
             +D C     C   CP G+   DL+      D  R    + +       L        +
Sbjct: 589 QGIDTCAATGLCAQRCPVGINTGDLVKKLRSRDADRTKTAEWLATHFSTALQGARFTLHV 648

Query: 116 RLGLRAVVPRPALFKALTRSGQVLRPLLPASVKRKLPAQVTTPGQRPAVRHAR-RILMLE 174
             G R ++  P L K      ++ +  +P      +P         PAV   R R++ L 
Sbjct: 649 ANGARMLLGAPRLAKLSASMTKLSKGQIP-QWTAAMPQPEKAIRFSPAVTDERPRVVYLA 707

Query: 175 GCVQPALSP--------NTNAAAARLLDRLGISVQ-PVRQAG-CCGAVDYHLNAQEQGLQ 224
            CV  A+ P        +       LL++ G  V  P  Q   CCG         EQ   
Sbjct: 708 ACVSRAMGPAAGDKEQMSLYDKTRSLLEKAGYQVVFPDNQDSLCCGQPFASKGYAEQAEH 767

Query: 225 RARRNIDAWWPAIEAGVEAIVQTASGCG-AFVRDYGHLLEKDPHYAAKAARVSALSRDLV 283
           + +  I A   A   G++ I    S C    V+D G              R+     D V
Sbjct: 768 KRQELIGALLHASRGGLDPIYCDTSPCTLRLVQDLGD------------TRLDLY--DPV 813

Query: 284 EILRDEPIEQLALCAEQR-LAFHCPCTLQHALKLGGAVEAL--LTRLGFTLTSVPDGHLC 340
             +R   +++L    ++  +A H  C+ QH     G  +AL  L R       +P+G  C
Sbjct: 814 RFIRTHLMDRLDFTPQEAPIAVHVTCSTQHL----GESQALIDLARRCSNTVVIPEGIHC 869

Query: 341 CGSAGTYSLTQPELS 355
           CG AG    T PEL+
Sbjct: 870 CGFAGDKGFTTPELN 884



 Score = 25.0 bits (53), Expect = 0.010
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 288 DEPIE---QLALCAEQRLAFHCPCTLQHALKLGGAVEALLTRLGFTLTSVPDGHLCCGSA 344
           DEP++    L + +E  L F    T    +       AL+          PD   CC +A
Sbjct: 235 DEPLDILSHLLVGSEGTLGFISAVTYDTVVDHPNKASALIV--------FPDVETCC-NA 285

Query: 345 GTYSLTQPELSLQLRDNRLNALESGKPHLIA 375
            T   TQP  +++L D R       KP + A
Sbjct: 286 VTVLKTQPVSAVELLDRRSMRSVQNKPGMPA 316