Pairwise Alignments

Query, 631 a.a., transpeptidase (penicillin-binding protein 2) from Pseudomonas putida KT2440

Subject, 582 a.a., peptidoglycan DD transpeptidase from Pseudomonas putida KT2440

 Score =  168 bits (425), Expect = 7e-46
 Identities = 171/600 (28%), Positives = 268/600 (44%), Gaps = 83/600 (13%)

Query: 27  MVFSLCAVLVG----RLYVLQVLQHDQQTAVSENNRVHVLPIAPERGLIYDRNGVVLADN 82
           +V  L A++VG    R+  LQV+  D      +   +  +PI   RGLI DRNG  LA +
Sbjct: 15  VVIGLLAIMVGAICWRIIDLQVVDRDFLKGQGDARSLRHIPIPAHRGLITDRNGEPLAVS 74

Query: 83  KPSFDLTMTRERAGGDSAKVLDTLTQVLGLTEDDRKQFDKDLRRGRKPFEPVTLMVGLSE 142
            P   L    +       +    L   LG  ++ ++  ++  ++  K F  + L+ GL+ 
Sbjct: 75  TPVTTLWANPKEMQASKER-WPQLAAALG--QNPQQLIERLTQQANKEF--IYLVRGLTP 129

Query: 143 EQIALVAVNQFRLPGLEVEPQFIREYPLAGHFAHSVGYVGRINEKEAKTLDSTEYRGTQS 202
           EQ   V     ++PG+    +F R YP     AH VG+           LD         
Sbjct: 130 EQGQHVL--DLKVPGVYGLEEFRRFYPAGDVTAHMVGFTD---------LDDH------- 171

Query: 203 IGKTGIERFYESQLHGHVGYEEVETNAQGRVMRVLN-HKDPTPGQDIVLTLDAHLQIAAE 261
            G+ G+E  YE  L G  G  +V  + +GR+++ +   K+   G+ + L++D  LQ  A 
Sbjct: 172 -GREGVELAYEEWLAGVPGKRQVIKDRRGRLIKDIQVTKNAKAGKTLALSIDLRLQYLAT 230

Query: 262 KALGD-------RRGSVVVLDPANGDVLAMVSNPSFDPNLFVKGISFKQYAALRDSIDRP 314
           + L +       + GS+V++D   G+VLAMV+ P+++PN              R      
Sbjct: 231 RELRNAIAEQDAKAGSLVIMDVKTGEVLAMVNQPTYNPN------------NRRSMFPAA 278

Query: 315 LFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRV-FDPGYYELPNYDHKYRNWNRSGD 373
           + NR +  ++ PGSTVKP    A L SG   P  +V   PG  ++  Y  K  + +RS  
Sbjct: 279 MRNRAIIDVFEPGSTVKPISMSAALQSGRWKPTDKVEVYPGSLQIGRYTIK--DVSRSEG 336

Query: 374 GWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMFEEASGLMPS-AEW 432
             +D+   ++ S++     +A  +G + ++  M++ GLGQ   L    E  G +P+  EW
Sbjct: 337 PILDLTGILINSSNVGMSKIAFDIGGEAIYRVMSQVGLGQYTGLGFPGERVGNLPNHREW 396

Query: 433 KRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGVWHRPHLAMTVGGDTPID 492
           ++A         ET  L  G G + VT LQL  A + LA+ G      L++     TP  
Sbjct: 397 RKA---------ETATLSYGYG-VSVTALQLVHAYAALANDG--KMVPLSIIKVDKTPEA 444

Query: 493 PNPMPDIVLHDKHAWDQVSQGMQMVMHDPRGIARAAAAGAQYRIAGKSGTAQVVAIKQGE 552
              +P      K   + V   +Q V+  PRG+ RA      Y +AGKSGTA+   +   +
Sbjct: 445 VQAIP------KEVAETVQGMLQQVIEAPRGVFRAQV--PFYHVAGKSGTARKATV-GAK 495

Query: 553 RYNRNKTLERHRDNALFVGFAPAEHPSVVVAVMIE----NGEAGGRVAGPVVREVMDAYL 608
            Y  N         +LF GF P   P   + V+I+     G  GG V+ PV   VM   L
Sbjct: 496 GYTENAY------RSLFAGFGPMSDPRYAIVVVIDEPRKGGYFGGLVSAPVFSNVMSGTL 549