Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 454 a.a., porin from Pseudomonas simiae WCS417

 Score =  271 bits (693), Expect = 3e-77
 Identities = 175/456 (38%), Positives = 242/456 (53%), Gaps = 49/456 (10%)

Query: 8   LARSVLAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQG 67
           + +S LA+++A G  +   A   GF+ED+K  L LRN+Y N D R+ G    K EEW QG
Sbjct: 1   MKKSTLALAVALG-AIAQQAGAAGFVEDSKATLGLRNFYINTDNRN-GTGANKNEEWGQG 58

Query: 68  FIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSE-------------LLPVHDDGR 114
           F  +F SGYT G +GFG+D I L GV+LDSGGGT+G+              + P   +G+
Sbjct: 59  FDLRFISGYTQGTVGFGVDAIGLLGVRLDSGGGTNGATKPSGANPGSYGGTIFPSEHNGK 118

Query: 115 AADDYGRAGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSL 174
           A +DY   GL AK ++S TELK+G L P +P++  +DGRLLPQTF+G  + + +I+ L+L
Sbjct: 119 AVNDYSSLGLTAKAKISQTELKLGTLQPKLPVIITNDGRLLPQTFQGGQITTNDIKDLTL 178

Query: 175 QAGQYREVSLRHSSDMQDLSAWAA--PGVT---SDGFNYAGAEYRFNQQRTLIGAWHSQL 229
             GQ  +   R+SS  ++LS   A   G T   S+ F YAG +Y+  +  T    ++  L
Sbjct: 179 VGGQIEKAKGRNSSSNENLSLSGANSRGATWRDSNKFIYAGGDYKITKDLT-AQYYYGNL 237

Query: 230 EDIYQQSYFNLLHSQRVGEWTLGANLGYFIDRDDG-----------------QARIGDIQ 272
           ED Y+Q +  L H+  +G   L ++L YF   DDG                 +A  G + 
Sbjct: 238 EDFYKQHFLGLTHNWAIGPGVLKSDLRYFNSSDDGANGNESAYFTTGNYQGFRAGKGKVD 297

Query: 273 SRTGYALLSASHSGHTLYLGLQKVSGDSQ--WMSVYGSSGRTLGNDMFNGNFSNADERSW 330
           +     L   + +GHT   G Q  +G S   W++    S   L  DM    F+ A ER+W
Sbjct: 298 NNLYSGLFLYTVAGHTFGGGYQVSNGSSDFPWLNQGDGSSAYLTTDMQIQKFARAGERTW 357

Query: 331 QVRYDYNFAALGVPGLLAMVRYGHGENATTAAGS------NGK-EWERDAEVNYTFQSGA 383
           Q RY Y+FA +GVPGL A V Y  G +  T A +      NG+ EWERD  V Y    G 
Sbjct: 358 QARYAYDFAKVGVPGLTAGVVYLKGSDIDTVANTASRTQFNGQSEWERDITVAYVIPEGP 417

Query: 384 LKNLNIRLNNATNRRSFNS--DLDQTRLIVSYPLTL 417
           LKNL +   NA  R       D D+ RLIVSY + L
Sbjct: 418 LKNLGVAWKNAMWRTDIAGARDQDENRLIVSYSIPL 453