Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 440 a.a., porin from Pseudomonas simiae WCS417

 Score =  211 bits (538), Expect = 3e-59
 Identities = 153/440 (34%), Positives = 226/440 (51%), Gaps = 39/440 (8%)

Query: 11  SVLAVSLAFGLGLPAWAQE-------GGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEE 63
           S+LA+++  G+   A+A+         GF+E +     LRNYY NR+ R+ G A     +
Sbjct: 6   SLLALAVCAGISQMAFAESVTDQADSKGFIEGSSVTGLLRNYYMNRN-REGGRADNI--D 62

Query: 64  WAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAG 123
           W QG +  ++SG+T G IGFG+D  A  G+KLD+    +G+  LP    G   D YG  G
Sbjct: 63  WTQGAMLNYASGFTQGTIGFGVDAYAYGGLKLDATHADAGTGNLPTDRHGDPEDAYGSVG 122

Query: 124 LAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVS 183
            A K+++S T+LK G++ P  P+      RLLPQT  G  L S EI GL L+AG +   +
Sbjct: 123 AAVKIKVSKTQLKFGDMQPTAPVFATGGTRLLPQTATGFDLTSSEIAGLDLEAGHFTSTN 182

Query: 184 LRHSSDM-QDLSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLH 242
              +S+   D+ A  A  + ++  ++ G +Y F+   +    +  +LEDI++Q Y NL +
Sbjct: 183 SGMTSNHDHDIYATYA-NIAANSASFLGGKYTFSPSLSAT-VYAGELEDIWRQYYTNLNY 240

Query: 243 -SQRVGEWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASH--SGHTLYLGLQKVSGD 299
               V + +L  +   +   D G A+ G I + T Y+L +A      HTL L  QKV GD
Sbjct: 241 VIPLVHDQSLALDGNLYRTLDTGSAKAGAINNTT-YSLAAAYSFLQAHTLTLSFQKVHGD 299

Query: 300 SQWMSV--------YGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVR 351
           + +  +         G     L N +  G+F+   E+SW +RYD N A+ GVPGL  M R
Sbjct: 300 TPFDYIGTGNNGAGEGGDSVYLANSVQWGDFNGPGEQSWGIRYDLNMASYGVPGLSFMGR 359

Query: 352 YGHGE--NATTAA---------GSNGKEWERDAEVNYTFQSGALKNLNIRLNN---ATNR 397
           Y +G   N T            G +G   E D E  Y  QSG  KNL++R+ +   A N 
Sbjct: 360 YINGSDINGTHTPDHSAYAGDYGDDGAHHETDLEAKYVIQSGPAKNLSLRVRDAIVAANA 419

Query: 398 RSFNSDLDQTRLIVSYPLTL 417
              + DL++ RLIV YP TL
Sbjct: 420 DQRDGDLNELRLIVDYPFTL 439