Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 430 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  372 bits (954), Expect = e-107
 Identities = 190/409 (46%), Positives = 260/409 (63%), Gaps = 11/409 (2%)

Query: 17  LAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAA--KGKVEEWAQGFIFKFSS 74
           +A  L   A A+E GF+E A+  L  RNY+F+RD+ D   A  + + +EWAQGFI   SS
Sbjct: 20  IAAALCAEATAEEAGFIEGARATLQARNYFFSRDYADIKGASTQSRTQEWAQGFILNASS 79

Query: 75  GYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATE 134
           GYT G +G G+D   L G KLDS    + S LLP  D G++AD+Y R G A K ++S TE
Sbjct: 80  GYTQGTLGVGVDVTGLLGFKLDSSPEHARSGLLPSLDSGKSADEYSRLGAAIKFKVSQTE 139

Query: 135 LKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLS 194
           LKVGEL+P++P+L + D RLLP T++GAML+SRE  GL+L AGQ+R  SLR SS+ Q + 
Sbjct: 140 LKVGELMPNLPVLLFSDLRLLPPTYQGAMLESREFAGLTLSAGQFRSTSLRDSSNSQKMY 199

Query: 195 AWAAPGV--------TSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRV 246
           A     +        TSD FNY GA+Y FN  RT +G W +QLEDIYQQ +++  H++ +
Sbjct: 200 ALVNDPINPARLARFTSDRFNYVGADYAFNDNRTSVGVWQAQLEDIYQQRFYSFKHAEPL 259

Query: 247 GEWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVY 306
           G WTLG N GYF  R+DG    GD  +   ++L SA   GHT Y+G Q++ GD  ++ V 
Sbjct: 260 GSWTLGVNAGYFDAREDGSKVAGDYDNHALFSLFSAKTGGHTFYVGYQQIGGDDGFIQV- 318

Query: 307 GSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNG 366
           G++   +GN +    FS   ERSWQVR+DYNF ALG+PGL + +RY  G +  T  G  G
Sbjct: 319 GANTNPMGNTLPTYEFSAPGERSWQVRHDYNFVALGLPGLTSTLRYVKGRDVETGLGFEG 378

Query: 367 KEWERDAEVNYTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSYPL 415
           ++ ERD ++ Y  QSG L  L IR+ N   R ++ +D+D+ RLI+SY +
Sbjct: 379 RDRERDLDLAYVVQSGPLAGLGIRVRNVMARSNYRTDIDENRLILSYTI 427