Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  260 bits (665), Expect = 5e-74
 Identities = 168/447 (37%), Positives = 239/447 (53%), Gaps = 36/447 (8%)

Query: 5   TCTLARSVLAVSLAFGLGLPAWAQE---GGFLEDAKGGLTLRNYYFNRDFRDPGAA---- 57
           TC    ++ A     G+G    A E    GF+E +   +  RN+YFNRD RD  A     
Sbjct: 2   TCRSPLTLAACLALAGVGSQVVAAEKSADGFMEGSTLSVLNRNFYFNRDNRDSVAPTHNP 61

Query: 58  -----KGKVEEWAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGS----ELLP 108
                 G  E W    I +F SG+T G +G GLD  A+ G+KLD+GGG +G     ++LP
Sbjct: 62  SKQADNGYSEAWGHAVITRFESGFTQGTVGVGLDAFAMLGLKLDTGGGRNGGRSSFDVLP 121

Query: 109 VHDDGRAADDYGRAGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSRE 168
           V  DG+A D+Y + G AAKLR+  T LKVG++ P  P++   D RLLP++FRG  L++  
Sbjct: 122 VDRDGQARDEYTKVGGAAKLRLFDTVLKVGDVFPANPVVAAGDSRLLPESFRGVTLENSS 181

Query: 169 IEGLSLQAGQYREVSLRHSSDMQD--LSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWH 226
           I+ L+LQAG+   +S   SSD+++  ++ +  P V S    Y G +YR N +   +  + 
Sbjct: 182 IKDLTLQAGRLHAMSQPMSSDLRENFVTFYGGP-VDSPWIAYGGGDYRLN-EHVSVSLFS 239

Query: 227 SQLEDIYQQSYFNLLHSQRVGE-WTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHS 285
           S+L+D + Q Y     S  + E   L     Y+   D+GQ R+G   +    A L     
Sbjct: 240 SRLKDAWNQYYAGTSLSWPLSEALALIGGFNYYKAVDEGQQRLGAFDNDIWSAKLGVRFG 299

Query: 286 GHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPG 345
            HTL L  Q+ +GD  +  +  S    L N +   +F+   ERSW +RYD N AA GVPG
Sbjct: 300 AHTLALTHQRNNGDDDFDYLRQSDSIFLDNSIQYSDFNAPKERSWMLRYDLNMAAYGVPG 359

Query: 346 LLAMVRYGHGENA-----------TTAAG---SNGKEWERDAEVNYTFQSGALKNLNIRL 391
           L  M RYG G +A              AG   ++ K WERD EV Y  Q+GA K+L++R+
Sbjct: 360 LSFMTRYGKGNDADYSNANATYMRRDVAGNPLTDQKRWERDIEVKYVVQTGAAKDLSLRV 419

Query: 392 NNATNR-RSFNSDLDQTRLIVSYPLTL 417
             AT R  +F SDLD+ R+IV YPL++
Sbjct: 420 RQATTRATAFESDLDEVRMIVEYPLSI 446