Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 426 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  278 bits (711), Expect = 2e-79
 Identities = 157/402 (39%), Positives = 222/402 (55%), Gaps = 19/402 (4%)

Query: 29  EGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFIFKFSSGYTPGLIGFGLDGI 88
           +  F+ D  G L LRN+YF+RDF    A + +  EWAQGF+ +  SGYT G++GFGLD  
Sbjct: 23  QAAFIHDGSGSLELRNFYFDRDFHGDSATQSRRGEWAQGFMLRLQSGYTDGVVGFGLDAA 82

Query: 89  ALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATELKVGELLPDIPLLR 148
            + G+KLDS    SGS LLP   D RAADDY +A    K R++ +ELK G L P +PLL 
Sbjct: 83  GMLGLKLDSSPDRSGSGLLPRGSDKRAADDYAKAVATFKARLAQSELKAGGLSPQLPLLA 142

Query: 149 YDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLSAWAAPG-----VTS 203
            +  RL PQ F G  L S++++  +    Q     LR S+D +DL+A A  G     VTS
Sbjct: 143 SNSSRLFPQWFNGVQLVSKDLDRFTFTLLQVDATKLRDSTDYEDLTAMAQQGAYSATVTS 202

Query: 204 DGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEWTLGANLGYFIDRDD 263
           D   YAG +Y+     TL     S LED++++ +       R+G   +     +F  R+ 
Sbjct: 203 DRLRYAGVDYQPLNNLTL-SLHTSVLEDLFRRDFAGFKFKTRLGPGDVFTEWRWFNAREQ 261

Query: 264 GQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMFNGNFS 323
           G+A +G + ++T       S  GHT   G QKV GD+ +  V G +   L ++     F+
Sbjct: 262 GRALLGGVDNQTLSTNFGYSVQGHTFSGGYQKVRGDTAYAYV-GGTDTYLFSEQQVSTFA 320

Query: 324 NADERSWQVRYDYNFAALGVPGLLAMVRYGHGE------------NATTAAGSNGKEWER 371
            A+ER+W +RYDYNFAA+G+PGL   VRY  G+             A  A    G+EWER
Sbjct: 321 LANERAWMLRYDYNFAAVGIPGLTFNVRYVKGDQVDPQRIASVKGRALAAGDGEGREWER 380

Query: 372 DAEVNYTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSY 413
             ++ Y  QSGAL+N+++R  NA+ R +F    D+ R+IV Y
Sbjct: 381 TTDITYVVQSGALRNVSLRWRNASMRSNFADAADENRVIVGY 422