Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 417 a.a., phenylacetic acid-specific porin from Pseudomonas putida KT2440

 Score =  274 bits (700), Expect = 4e-78
 Identities = 154/401 (38%), Positives = 232/401 (57%), Gaps = 12/401 (2%)

Query: 21  LGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFIFKFSSGYTPGL 80
           L +PA A    F+ D+   L LRN+Y NRDFR   A + K EEW QGF  K  SG+T G 
Sbjct: 24  LPMPALAD---FIGDSHARLELRNHYINRDFRQSNAPQAKAEEWGQGFTAKLESGFTEGP 80

Query: 81  IGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRA-ADDYGRAGLAAKLRMSATELKVGE 139
           +GFG+D +   G+KLDS      + LLP   +     DDY   GL  K+R+S + L++G 
Sbjct: 81  VGFGVDALGQLGIKLDSSRDRRNTGLLPFGPNSHEPVDDYSELGLTGKVRVSKSTLRLGT 140

Query: 140 LLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLSAWAAP 199
           L P +P++ Y+D RLL  +F+G +L S++++GL+  AG+  + +LR SS   D+   AA 
Sbjct: 141 LQPILPVVVYNDTRLLASSFQGGLLTSQDLDGLTFNAGRLTKANLRDSSGRDDIGYGAA- 199

Query: 200 GVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEW-TLGANLGYF 258
             +SD  ++ G  Y    Q T +  ++++L+DIY+Q +  L+ ++ + E  +L ++L YF
Sbjct: 200 --SSDHLDFGGGSYAITPQTT-VSYYYAKLQDIYRQQFVGLIDTRPLAEGVSLRSDLRYF 256

Query: 259 IDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMF 318
             R+DG  R G+I +R   A+ +     H      Q++SGDS +  V G    T+    +
Sbjct: 257 DSRNDGAERAGNIDNRNFNAMFTLGVRAHKFTATWQQMSGDSAFPFVNGGDPFTVNLVTY 316

Query: 319 NGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGKEWERDAEVNYT 378
           N  F+ A   SWQVRYDY+F A+G+PGL  M RY  G +A TA  +NG+E ERD ++ Y 
Sbjct: 317 N-TFTRAGLDSWQVRYDYDFVAMGIPGLSFMTRYTDGRHAETATVTNGRERERDTDITYV 375

Query: 379 FQSGALKNLNIRLNNATNR--RSFNSDLDQTRLIVSYPLTL 417
            QSG  K++++R  N T R      + +D+ RLI+ Y L L
Sbjct: 376 IQSGPFKDVSLRWRNVTFRSGNGLTNAVDENRLIIGYTLAL 416