Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 416 a.a., porin-like protein from Pseudomonas putida KT2440

 Score =  380 bits (977), Expect = e-110
 Identities = 197/406 (48%), Positives = 260/406 (64%), Gaps = 10/406 (2%)

Query: 17  LAFGLGL---PAWAQEGGFLEDAKGGLTLRNYYFNRDFRD-PGAAK-GKVEEWAQGFIFK 71
           +A GL L   P  A EGGF ED+K  L+ RNYYF+RDF D  GA K  K EEWAQGFI  
Sbjct: 7   VALGLTLLSQPLLAAEGGFFEDSKATLSARNYYFSRDFSDIVGANKQSKAEEWAQGFILD 66

Query: 72  FSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMS 131
           F SGYTPG +GFG+D + L G+KLDS    + + LLPVH DGRAAD+Y R     K R+S
Sbjct: 67  FKSGYTPGPVGFGVDALGLLGIKLDSSPDRTNTGLLPVHGDGRAADEYSRLAPTFKARLS 126

Query: 132 ATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQ 191
            TEL+ GEL P++P+L + D RLLP T++G  L S EI+GL++QAG  +   LR+     
Sbjct: 127 KTELRAGELQPNLPVLTFSDIRLLPPTYQGVSLSSSEIDGLTMQAGHLKSTHLRNEGGDG 186

Query: 192 DLSAWAA----PGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVG 247
            ++A           SD FNY G +Y FN  ++ +  W+ QLEDIYQQ +  L HS+ VG
Sbjct: 187 KMNAMLGHVPMRQAESDAFNYVGGDYAFNANQSSVSLWYGQLEDIYQQGFVGLKHSKPVG 246

Query: 248 EWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYG 307
           +W L ANLGYF  R+ G A +G+I ++  ++L +A H GH+ + G Q + GDS +  V+ 
Sbjct: 247 DWVLSANLGYFTAREQGDALLGNIDNQAFFSLFTARHGGHSFHAGYQGIYGDSPFPRVFA 306

Query: 308 SSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGK 367
           +    LGN++    F+  DERS+QVRYDYNFAA+GVPGL A VRY  G N  T  G  G+
Sbjct: 307 NIS-PLGNEVPTYEFAYTDERSYQVRYDYNFAAMGVPGLTATVRYITGNNVDTGLGYEGR 365

Query: 368 EWERDAEVNYTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSY 413
           + ERD ++ Y  QSGALK L IR+ NA  R ++ SD+D+ RL + Y
Sbjct: 366 DRERDLDIGYAVQSGALKGLGIRVRNAMARSNYRSDIDENRLTLVY 411