Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 449 a.a., putative OprD family outer membrane porin from Pseudomonas putida KT2440

 Score =  237 bits (604), Expect = 6e-67
 Identities = 155/439 (35%), Positives = 236/439 (53%), Gaps = 36/439 (8%)

Query: 14  AVSLAFGLGLPAWAQ--EGGFLEDAKGGLTLRNYYFNRDFRDP--------GAAKGKVEE 63
           A+SLA  L  PA+A   + GF++  +  +  RN++F++D+R+         G  +    E
Sbjct: 10  ALSLAILLASPAFADSDDEGFIDGTRVHVLNRNFFFSQDYRNGDFTLNPNNGERQSLHRE 69

Query: 64  WAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSEL-LP-------VHDDGRA 115
           W  G I    SG+T G +GFG+D   L G+KLD G G  G+ + +P        + DG  
Sbjct: 70  WGHGIIANLQSGFTRGTVGFGVDVQGLVGLKLDGGNGAVGNGVGVPGIVSRSGSNFDGEP 129

Query: 116 ADDYGRAGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQ 175
            D YG+ G A K+R   TEL+ G++ P  P+L   D RLLPQT RG + ++  ++GLSLQ
Sbjct: 130 KDSYGKVGTALKVRAFDTELRYGDVSPTSPVLHASDIRLLPQTLRGFIFNNNSLDGLSLQ 189

Query: 176 AGQYREVSLRHSSDMQ-DL-SAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIY 233
            G+    S R++S+ + DL + +A     ++   Y G +YRFN Q TL     S+L+D++
Sbjct: 190 GGKLESSSDRNASNHRGDLGTVYAGRIKGANDVVYLGGDYRFNDQLTL-RLHSSRLDDVW 248

Query: 234 QQSYFNLLHSQRVG-EWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLG 292
            QS+F++ H Q +G E +L   L Y+  RD GQA  G I + +       +   H   L 
Sbjct: 249 NQSFFSVDHVQPLGSELSLKTGLNYYRTRDSGQALAGQIDNDSWSVHAGLAAGAHGFKLS 308

Query: 293 LQKVSGDSQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRY 352
             ++ GD+ +  V+ +    L       +F+N +ER+W+ RYDY+FA LGVPGL    RY
Sbjct: 309 YTRIDGDTPFDYVWNTYDLQLDAASQVSDFNNPNERAWEARYDYDFAPLGVPGLSLTARY 368

Query: 353 GHGE--NATTAAGS--------NGKEWERDAEVNYTFQSGALKNLNIRLNNATNR----R 398
             G   + T A G+        +G+ WER+  + Y  QSG  K+L+  L  AT+R     
Sbjct: 369 VRGTDIDGTRAGGAYSYFNGTEDGRHWERNLWLKYVLQSGPAKDLSFNLMQATHRVGGDH 428

Query: 399 SFNSDLDQTRLIVSYPLTL 417
              S++D+ RLIV YPL +
Sbjct: 429 VAESNVDELRLIVQYPLDI 447