Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 417 a.a., putative Porin from Pseudomonas putida KT2440

 Score =  303 bits (776), Expect = 6e-87
 Identities = 169/399 (42%), Positives = 229/399 (57%), Gaps = 11/399 (2%)

Query: 27  AQEGGFLEDAKGGLTLRNYYFNRDFRDP--------GAAKGKVEEWAQGFIFKFSSGYTP 78
           A   GF+ED+K  L LRN YFN +FRD           AK +  EWAQGF+  + SG+T 
Sbjct: 21  AGAAGFIEDSKLKLQLRNVYFNENFRDEQGMSARAAATAKSERVEWAQGFLLDYQSGFTQ 80

Query: 79  GLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSATELKVG 138
           G +G G+D + L GV+LDSG G SG+ LLPVHDDGRAAD++  AG+ AK R+ +T +K G
Sbjct: 81  GTLGLGVDAMGLLGVRLDSGRGRSGTGLLPVHDDGRAADEFASAGITAKARLGSTVVKHG 140

Query: 139 ELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQDLSAWAA 198
            LLP  P+L Y+D RLLPQT++G  L S +I+ L+L AG       R SSD   L     
Sbjct: 141 TLLPKTPVLVYNDARLLPQTYQGTQLTSTDIDNLTLTAGHLDRFKQRDSSDSTGLYLDGY 200

Query: 199 PGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQRVGEWTLGANLGYF 258
            G  S  F++AGA+Y  ++Q  L   +H +LE  Y+Q +  L+H   +G   L  +L YF
Sbjct: 201 GGPASGDFSFAGADYAVSKQLRL-SYFHGELEHFYRQDFAGLVHDLPLGGGVLTTDLRYF 259

Query: 259 IDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVYGSSGRTLGNDMF 318
             RD G A  G I +      LS +HSGHT+  G Q + G++    + G++  +  N + 
Sbjct: 260 KSRDSGTAYGGGIDNDMFSGQLSYAHSGHTVGAGYQVLDGEAGLPYISGATVYSFSN-VG 318

Query: 319 NGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNGKEWERDAEVNYT 378
            G F   +E++W   Y YNFAA GVPGL  M RY  G+N   + G   KEWERDAE+ Y 
Sbjct: 319 IGKFIEEEEKTWMASYAYNFAAAGVPGLTFMTRYLSGDNG-RSGGEGIKEWERDAEIAYV 377

Query: 379 FQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSYPLTL 417
            Q G LK L ++L N   R  F    D  RL ++Y + +
Sbjct: 378 VQGGPLKGLGVKLRNYVYRSDFARGRDSNRLYLTYDIAI 416